Strain Fitness in Pseudomonas simiae WCS417 around PS417_27985

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,037,589	+		PS417_27980	0.72	-3.9
6,037,679	+		PS417_27980	0.76	+0.7
6,037,734	-		PS417_27980	0.78	+0.9
6,038,019	-		PS417_27980	0.89	-0.5
6,038,019	-		PS417_27980	0.89	+0.3
6,038,304	-				+1.1
6,038,458	-				-0.4
6,038,488	-				-0.4
6,038,594	+				-1.9
6,038,595	-				-0.4
6,038,918	+		PS417_27985	0.22	+0.2
6,038,980	+		PS417_27985	0.26	+0.1
6,038,980	+		PS417_27985	0.26	-2.8
6,038,981	-		PS417_27985	0.26	+1.3
6,038,984	+		PS417_27985	0.26	+0.4
6,038,984	+		PS417_27985	0.26	+1.0
6,038,985	-		PS417_27985	0.26	-1.9
6,038,985	-		PS417_27985	0.26	+0.2
6,039,081	-		PS417_27985	0.31	+0.5
6,039,083	+		PS417_27985	0.31	-0.2
6,039,258	-		PS417_27985	0.40	+0.8
6,039,276	-		PS417_27985	0.41	-0.7
6,039,302	+		PS417_27985	0.42	-0.9
6,039,302	+		PS417_27985	0.42	-0.4
6,039,435	-		PS417_27985	0.49	+0.0
6,039,458	+				+0.3
6,039,459	-		PS417_27985	0.50	+0.6
6,039,668	+		PS417_27985	0.61	+0.4
6,039,668	+		PS417_27985	0.61	+0.7
6,039,669	-		PS417_27985	0.61	+0.0
6,039,669	-		PS417_27985	0.61	-1.1
6,039,839	+		PS417_27985	0.70	-0.9
6,039,840	-		PS417_27985	0.70	-0.6
6,039,980	+		PS417_27985	0.77	-2.2
6,039,980	+		PS417_27985	0.77	+0.6
6,039,981	-		PS417_27985	0.77	+0.9
6,039,981	-		PS417_27985	0.77	+0.2
6,039,981	-		PS417_27985	0.77	+1.1
6,039,982	+		PS417_27985	0.77	-0.9
6,040,274	+				+0.3
6,040,274	+				-1.0
6,040,274	+				+0.9
6,040,275	-				-0.8
6,040,507	-		PS417_27990	0.16	+5.2
6,040,637	-		PS417_27990	0.46	+1.8
6,040,754	+		PS417_27990	0.73	-0.9
6,040,787	-		PS417_27990	0.80	-1.4
6,040,884	+				-0.4
6,040,884	+				-0.7
6,040,885	-				-3.2
6,040,885	-				+0.8
6,040,992	+				-0.7