Strain Fitness in Pseudomonas simiae WCS417 around PS417_27300

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,890,900	+				+0.4
5,890,901	-				+0.1
5,890,901	-				-2.3
5,890,901	-				-0.4
5,891,028	-		PS417_27290	0.15	-2.7
5,891,045	+		PS417_27290	0.18	-3.1
5,891,046	-		PS417_27290	0.18	-1.1
5,891,496	+				+0.4
5,891,497	-				-1.7
5,891,533	+				-2.2
5,891,549	-				-1.1
5,891,553	+				-0.7
5,891,554	-				-2.5
5,891,568	+				+0.8
5,891,569	-				-0.7
5,891,577	+				-0.5
5,891,687	+		PS417_27295	0.22	-0.5
5,891,709	+		PS417_27295	0.32	-3.9
5,891,729	+		PS417_27295	0.42	+0.5
5,891,729	+		PS417_27295	0.42	+1.0
5,891,732	+		PS417_27295	0.43	+0.8
5,891,732	+		PS417_27295	0.43	+1.1
5,892,051	-		PS417_27300	0.64	-3.3
5,892,179	+				-0.8
5,892,187	-				-3.0
5,892,245	+				-2.1
5,892,300	-				+1.0
5,892,345	-				-1.1
5,892,345	-				+0.2
5,892,416	+				-1.3
5,892,417	+				+0.1
5,892,579	+		PS417_27305	0.24	-2.0
5,892,580	-		PS417_27305	0.24	-3.5
5,892,589	+		PS417_27305	0.25	-0.8
5,892,589	+		PS417_27305	0.25	+0.8
5,892,590	-		PS417_27305	0.25	-0.2
5,892,593	+		PS417_27305	0.26	+2.0
5,892,661	+		PS417_27305	0.37	+0.2
5,892,662	-		PS417_27305	0.37	-3.4
5,892,662	-		PS417_27305	0.37	+2.0
5,892,662	-		PS417_27305	0.37	-0.5
5,892,872	-		PS417_27305	0.70	+0.1
5,892,889	+		PS417_27305	0.73	+0.9
5,893,012	-				-1.8
5,893,021	+				-0.6
5,893,021	+				-1.6
5,893,022	-				-2.1
5,893,134	+				+0.5
5,893,147	+				+1.5