Strain Fitness in Pseudomonas simiae WCS417 around PS417_27075

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,843,753	+				+0.2
5,843,753	+				+0.4
5,843,753	+				+0.5
5,843,753	+				+3.7
5,843,753	+				-1.1
5,843,754	-				+0.5
5,843,754	-				-0.1
5,843,754	-				+0.2
5,843,754	-				+0.6
5,843,754	-				+1.1
5,843,754	-				-0.5
5,843,759	-				+0.4
5,843,759	-				-1.0
5,844,091	+		PS417_27070	0.40	+0.4
5,844,091	+		PS417_27070	0.40	-1.3
5,844,092	-		PS417_27070	0.40	-1.8
5,844,094	+		PS417_27070	0.40	-0.5
5,844,094	+		PS417_27070	0.40	-1.5
5,844,094	+		PS417_27070	0.40	-2.0
5,844,095	-		PS417_27070	0.40	+2.5
5,844,095	-		PS417_27070	0.40	+0.5
5,844,095	-		PS417_27070	0.40	+1.3
5,844,095	-		PS417_27070	0.40	-0.0
5,844,095	-		PS417_27070	0.40	-1.6
5,844,298	+		PS417_27070	0.62	+0.2
5,844,431	-		PS417_27070	0.76	-0.5
5,844,650	+				-0.7
5,844,651	-				-0.2
5,844,724	+				+0.5
5,844,725	-				-1.0
5,844,725	-				+0.7
5,844,725	-				-2.7
5,844,741	+				+0.3
5,844,742	-				-1.1
5,844,742	-				+0.7
5,844,826	-		PS417_27075	0.13	+0.9
5,844,826	-		PS417_27075	0.13	+1.3
5,845,035	+		PS417_27075	0.49	-2.5
5,845,035	+		PS417_27075	0.49	-0.7
5,845,188	+		PS417_27075	0.76	-3.2
5,845,208	+		PS417_27075	0.80	-1.6
5,845,209	-		PS417_27075	0.80	-0.1
5,845,226	+		PS417_27075	0.83	-2.0
5,845,267	+		PS417_27075	0.90	-1.3
5,845,268	-				-0.7
5,845,419	+				-1.5
5,845,419	+				+1.9
5,845,419	+				+1.9
5,845,420	-				-2.3
5,845,425	+				-1.1
5,845,425	+				+0.5
5,845,560	+				-1.5
5,845,560	+				-1.1
5,845,560	+				-0.1
5,845,561	-				+0.9
5,845,704	+		PS417_27080	0.15	-1.5
5,845,704	+		PS417_27080	0.15	-1.0
5,845,704	+		PS417_27080	0.15	+0.9
5,845,704	+		PS417_27080	0.15	-0.2
5,845,704	+		PS417_27080	0.15	+1.0
5,845,704	+		PS417_27080	0.15	-4.2
5,845,705	-		PS417_27080	0.15	-1.3
5,845,705	-		PS417_27080	0.15	-2.1
5,845,705	-		PS417_27080	0.15	+0.2
5,845,755	+		PS417_27080	0.17	+0.3
5,845,756	-		PS417_27080	0.17	-1.0
5,845,756	-		PS417_27080	0.17	+1.5
5,845,816	+		PS417_27080	0.20	-2.4
5,845,817	-		PS417_27080	0.20	-2.9
5,845,817	-		PS417_27080	0.20	+1.1
5,845,817	-				-0.5
5,845,817	-		PS417_27080	0.20	+0.7
5,845,869	+		PS417_27080	0.22	+1.1
5,845,869	+		PS417_27080	0.22	-1.5
5,845,869	+		PS417_27080	0.22	+0.3
5,845,871	+		PS417_27080	0.22	-3.0
5,845,872	-		PS417_27080	0.22	+1.3
5,845,878	+		PS417_27080	0.22	+0.5
5,845,879	-		PS417_27080	0.22	+0.4
5,845,920	+		PS417_27080	0.24	-0.7
5,845,920	+		PS417_27080	0.24	+0.8
5,845,921	-		PS417_27080	0.24	-0.9
5,845,921	-		PS417_27080	0.24	-0.5
5,845,921	-		PS417_27080	0.24	-0.1
5,846,217	+		PS417_27080	0.37	-1.8
5,846,217	+		PS417_27080	0.37	+1.0
5,846,218	-		PS417_27080	0.37	+0.6
5,846,223	+		PS417_27080	0.37	-0.3