Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26895 and PS417_26900 are separated by 241 nucleotides PS417_26900 and PS417_26905 are separated by 96 nucleotides PS417_26905 and PS417_26910 are separated by 69 nucleotides
PS417_26895: PS417_26895 - phosphorylcholine phosphatase, at 5,807,963 to 5,809,021
_26895
PS417_26900: PS417_26900 - L-cystine transporter tcyP, at 5,809,263 to 5,810,654
_26900
PS417_26905: PS417_26905 - diacylglycerol kinase, at 5,810,751 to 5,811,263
_26905
PS417_26910: PS417_26910 - membrane protein, at 5,811,333 to 5,812,703
_26910
Position (kb) 5809
5810
5811 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5808.402 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.706 kb on - strand, within PS417_26895 at 5808.706 kb on - strand, within PS417_26895 at 5808.708 kb on + strand, within PS417_26895 at 5808.754 kb on + strand at 5808.754 kb on + strand, within PS417_26895 at 5808.810 kb on + strand, within PS417_26895 at 5808.810 kb on + strand, within PS417_26895 at 5808.811 kb on - strand, within PS417_26895 at 5808.811 kb on - strand, within PS417_26895 at 5808.811 kb on - strand, within PS417_26895 at 5808.877 kb on + strand, within PS417_26895 at 5808.878 kb on - strand, within PS417_26895 at 5809.187 kb on + strand at 5809.288 kb on + strand at 5809.289 kb on - strand at 5809.289 kb on - strand at 5809.289 kb on - strand at 5809.289 kb on - strand at 5809.363 kb on + strand at 5809.363 kb on + strand at 5809.363 kb on + strand at 5809.364 kb on - strand at 5809.375 kb on + strand at 5809.476 kb on + strand, within PS417_26900 at 5809.477 kb on - strand, within PS417_26900 at 5809.514 kb on - strand, within PS417_26900 at 5810.005 kb on + strand, within PS417_26900 at 5810.606 kb on + strand at 5810.753 kb on - strand at 5811.298 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Polymyxin B sulfate 0.003 mg/ml remove 5,808,402 + PS417_26895 0.41 -1.6 5,808,461 + PS417_26895 0.47 +1.0 5,808,461 + PS417_26895 0.47 -2.1 5,808,461 + PS417_26895 0.47 -1.9 5,808,461 + PS417_26895 0.47 -2.0 5,808,461 + PS417_26895 0.47 -0.6 5,808,462 - PS417_26895 0.47 -0.4 5,808,462 - PS417_26895 0.47 +0.4 5,808,462 - PS417_26895 0.47 -0.7 5,808,462 - PS417_26895 0.47 +1.0 5,808,465 + PS417_26895 0.47 +0.4 5,808,465 + PS417_26895 0.47 +0.1 5,808,465 + PS417_26895 0.47 +1.0 5,808,465 + PS417_26895 0.47 -2.5 5,808,465 + PS417_26895 0.47 -1.2 5,808,466 - PS417_26895 0.47 -2.1 5,808,466 - PS417_26895 0.47 +1.4 5,808,466 - PS417_26895 0.47 -0.1 5,808,466 - PS417_26895 0.47 -0.0 5,808,706 - PS417_26895 0.70 -2.6 5,808,706 - PS417_26895 0.70 -1.5 5,808,708 + PS417_26895 0.70 -2.1 5,808,754 + +1.8 5,808,754 + PS417_26895 0.75 -1.0 5,808,810 + PS417_26895 0.80 +0.1 5,808,810 + PS417_26895 0.80 +0.8 5,808,811 - PS417_26895 0.80 +1.8 5,808,811 - PS417_26895 0.80 +0.3 5,808,811 - PS417_26895 0.80 -1.0 5,808,877 + PS417_26895 0.86 -1.5 5,808,878 - PS417_26895 0.86 -0.5 5,809,187 + -1.0 5,809,288 + -1.4 5,809,289 - -0.4 5,809,289 - +3.3 5,809,289 - -1.0 5,809,289 - -1.2 5,809,363 + +0.7 5,809,363 + +2.6 5,809,363 + -0.4 5,809,364 - +0.5 5,809,375 + -0.9 5,809,476 + PS417_26900 0.15 -1.5 5,809,477 - PS417_26900 0.15 -2.2 5,809,514 - PS417_26900 0.18 -2.0 5,810,005 + PS417_26900 0.53 -1.7 5,810,606 + -0.4 5,810,753 - -0.1 5,811,298 + +2.9
Or see this region's nucleotide sequence