Strain Fitness in Pseudomonas simiae WCS417 around PS417_26175

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,654,330	+				-1.8
5,654,331	-				+0.2
5,654,331	-				-0.7
5,654,333	+				-2.6
5,654,334	-				+0.8
5,654,334	-				+2.5
5,654,433	-				-0.2
5,654,618	+		PS417_26170	0.22	-0.5
5,654,618	+		PS417_26170	0.22	+1.8
5,654,619	-		PS417_26170	0.22	+1.0
5,654,619	-		PS417_26170	0.22	+0.9
5,654,658	-		PS417_26170	0.26	-0.1
5,654,658	-		PS417_26170	0.26	-1.5
5,654,658	-		PS417_26170	0.26	-0.2
5,654,769	-		PS417_26170	0.39	-1.2
5,654,868	-		PS417_26170	0.51	+0.0
5,654,868	-		PS417_26170	0.51	+0.1
5,654,967	-		PS417_26170	0.62	+0.3
5,655,027	-		PS417_26170	0.69	+1.2
5,655,027	-		PS417_26170	0.69	-2.5
5,655,184	-		PS417_26170	0.88	-3.4
5,655,188	+		PS417_26170	0.88	-0.2
5,655,188	+		PS417_26170	0.88	+1.0
5,655,189	-		PS417_26170	0.88	-0.2
5,655,189	-		PS417_26170	0.88	-0.6
5,655,189	-		PS417_26170	0.88	+0.5
5,655,293	+				+1.3
5,655,486	+		PS417_26175	0.30	-1.1
5,655,486	+		PS417_26175	0.30	-2.4
5,655,914	+				-4.3
5,655,914	+				+2.2
5,655,914	+				+1.1
5,655,914	+				+1.2
5,655,914	+				-0.4
5,655,915	-				-0.8
5,655,915	-				-0.5
5,655,915	-				-0.2
5,655,932	-				+0.7
5,656,342	+				-1.1
5,656,409	-		PS417_26180	0.12	+2.5
5,656,502	+		PS417_26180	0.15	-1.0
5,656,503	-		PS417_26180	0.15	-0.6
5,656,571	+		PS417_26180	0.17	+0.2
5,656,585	-		PS417_26180	0.18	+0.6
5,656,640	+		PS417_26180	0.19	-2.9
5,656,671	-		PS417_26180	0.20	+1.7
5,656,797	+		PS417_26180	0.25	+1.4
5,656,798	-		PS417_26180	0.25	+2.0
5,656,830	+				-2.0