Strain Fitness in Pseudomonas simiae WCS417 around PS417_25750

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,557,575	-				-0.3
5,557,727	+				-0.2
5,557,727	+				-0.2
5,557,731	+				+0.3
5,557,731	+				-1.7
5,557,732	-				-0.3
5,558,175	+				-0.8
5,558,176	-		PS417_25745	0.54	-0.8
5,558,413	-		PS417_25745	0.83	-2.6
5,558,512	-				-1.7
5,558,512	-				-0.6
5,558,539	+				-0.2
5,558,539	+				+0.6
5,558,539	+				-1.7
5,558,539	+				+1.0
5,558,539	+				-0.2
5,558,539	+				-0.8
5,558,539	+				+0.4
5,558,540	-				+2.2
5,558,540	-				+0.1
5,558,540	-				+0.5
5,558,540	-				+1.3
5,558,540	-				-2.4
5,558,540	-				-1.1
5,558,541	+				-1.5
5,558,541	+				-1.0
5,558,541	+				+1.5
5,558,541	+				-0.2
5,558,541	+				-0.9
5,558,541	+				-0.4
5,558,542	-				-0.0
5,558,542	-				-0.2
5,558,542	-				+0.6
5,558,607	+				-1.7
5,558,607	+				+1.2
5,558,607	+				-0.6
5,558,608	-				-0.9
5,558,616	+				+0.7
5,558,617	-				-1.2
5,558,617	-				+1.2
5,558,617	-				-1.2
5,558,691	+				-0.0
5,558,692	-		PS417_25750	0.10	-0.3
5,558,706	+		PS417_25750	0.11	-1.8
5,558,707	-		PS417_25750	0.11	-0.3
5,558,754	+				-1.2
5,558,754	+		PS417_25750	0.15	-1.4
5,558,754	+		PS417_25750	0.15	-1.9
5,558,754	+		PS417_25750	0.15	-0.3
5,558,754	+		PS417_25750	0.15	-3.0
5,558,754	+		PS417_25750	0.15	+0.7
5,558,755	-		PS417_25750	0.15	-1.9
5,558,755	-		PS417_25750	0.15	-3.4
5,558,755	-		PS417_25750	0.15	-1.0
5,558,755	-		PS417_25750	0.15	+1.2
5,558,809	-		PS417_25750	0.19	-0.5
5,558,823	+		PS417_25750	0.21	-3.2
5,558,824	-		PS417_25750	0.21	-0.0
5,558,880	+		PS417_25750	0.25	+0.2
5,558,880	+		PS417_25750	0.25	+1.1
5,558,880	+		PS417_25750	0.25	-0.3
5,558,880	+		PS417_25750	0.25	+0.3
5,558,880	+		PS417_25750	0.25	-2.0
5,558,881	-		PS417_25750	0.25	-0.9
5,558,881	-		PS417_25750	0.25	-2.7
5,558,881	-		PS417_25750	0.25	+1.1
5,558,881	-		PS417_25750	0.25	-2.7
5,558,881	-		PS417_25750	0.25	-1.1
5,558,881	-		PS417_25750	0.25	-0.7
5,558,881	-		PS417_25750	0.25	+3.2
5,559,053	+		PS417_25750	0.39	+0.5
5,559,054	-		PS417_25750	0.39	-0.9
5,559,156	+		PS417_25750	0.47	-3.5
5,559,156	+		PS417_25750	0.47	-1.8
5,559,217	+		PS417_25750	0.52	-1.8
5,559,312	+		PS417_25750	0.60	-0.5
5,559,313	-		PS417_25750	0.60	-1.6
5,559,406	-		PS417_25750	0.67	+0.4
5,559,406	-		PS417_25750	0.67	-1.1
5,559,555	+		PS417_25750	0.79	-1.2
5,559,556	-		PS417_25750	0.79	+0.5
5,559,678	-		PS417_25750	0.89	-0.4
5,559,678	-		PS417_25750	0.89	-3.0
5,559,914	+				+0.2
5,559,914	+				-2.8
5,559,914	+				+0.1
5,559,914	+				-1.2
5,559,914	+				+0.0
5,559,915	-				-0.8
5,559,915	-				-1.0
5,559,915	-				-0.9
5,559,915	-				+0.8
5,559,915	-				-0.5
5,559,915	-				-2.1
5,559,915	-				+2.4
5,559,915	-				-1.4
5,559,916	+				+0.6
5,559,916	+				-0.3
5,559,917	-				-1.8
5,559,963	+				-0.5
5,559,973	+				-1.7
5,559,973	+				-1.6
5,559,973	+				-0.5
5,560,138	+		PS417_25755	0.16	-0.1
5,560,327	+		PS417_25755	0.34	-2.3
5,560,328	-		PS417_25755	0.34	+1.5
5,560,468	+		PS417_25755	0.48	+0.5
5,560,468	+		PS417_25755	0.48	-0.4
5,560,468	+		PS417_25755	0.48	+0.2
5,560,469	-		PS417_25755	0.48	+1.0
5,560,469	-		PS417_25755	0.48	-0.3
5,560,520	-		PS417_25755	0.53	-1.1
5,560,681	+		PS417_25755	0.68	+0.6