Strain Fitness in Pseudomonas simiae WCS417 around PS417_25360

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,490,117	+		PS417_25355	0.18	+0.4
5,490,529	+		PS417_25355	0.61	+0.4
5,490,529	+		PS417_25355	0.61	-0.1
5,490,530	-		PS417_25355	0.61	+0.1
5,490,873	+				-0.5
5,490,874	-				+0.1
5,490,874	-				+1.1
5,490,874	-				+0.2
5,490,924	-				+0.0
5,490,961	+				-2.6
5,490,961	+				-2.3
5,490,961	+				+0.1
5,490,961	+				+1.3
5,490,966	+				-0.4
5,490,966	+				-0.4
5,490,967	-				+1.8
5,491,044	+				-2.1
5,491,044	+				+0.2
5,491,396	-		PS417_25360	0.70	-0.8
5,491,396	-		PS417_25360	0.70	-0.8
5,491,396	-		PS417_25360	0.70	+0.4
5,491,485	+		PS417_25360	0.86	-2.4
5,491,485	+		PS417_25360	0.86	-1.0
5,491,485	+		PS417_25360	0.86	-2.1
5,491,485	+		PS417_25360	0.86	-1.2
5,491,486	-		PS417_25360	0.86	-0.5
5,491,486	-		PS417_25360	0.86	-1.7
5,491,486	-		PS417_25360	0.86	-0.8
5,491,486	-		PS417_25360	0.86	-2.6
5,491,486	-		PS417_25360	0.86	-2.1
5,491,537	-				+1.8
5,491,793	-		PS417_25365	0.27	-0.3
5,491,844	-		PS417_25365	0.34	-1.7
5,491,844	-		PS417_25365	0.34	-2.3
5,491,846	+		PS417_25365	0.34	+0.5
5,491,849	+		PS417_25365	0.34	+0.9
5,491,850	-		PS417_25365	0.35	-0.5
5,491,850	-		PS417_25365	0.35	-2.5
5,492,097	+		PS417_25365	0.67	+0.9
5,492,097	+		PS417_25365	0.67	+0.1
5,492,097	+		PS417_25365	0.67	-0.2
5,492,098	-		PS417_25365	0.67	+0.1
5,492,098	-		PS417_25365	0.67	+0.1
5,492,098	-		PS417_25365	0.67	-0.8
5,492,098	-		PS417_25365	0.67	-0.5
5,492,326	+				+1.4
5,492,326	+				-0.2
5,492,326	+				+0.2
5,492,327	-				+0.1
5,492,327	-				+1.9
5,492,327	-				+0.8
5,492,327	-				+1.1
5,492,471	-				+0.2
5,492,472	+				-0.4
5,492,472	+				-1.8
5,492,497	+				-0.1
5,492,497	+				-1.4
5,492,497	+				-1.7
5,492,497	+				+0.5
5,492,498	-				+0.1
5,492,498	-				+0.3
5,492,498	-				+1.2
5,492,528	+				+0.5
5,492,528	+				+0.3
5,492,528	+				-1.4
5,492,529	-				-1.6
5,492,529	-				-3.8
5,492,529	-				+1.4
5,492,529	-				+0.5
5,492,529	-				+0.4
5,492,529	-				+0.3
5,492,529	-				+0.9
5,492,529	-				-1.0
5,492,530	+				+1.1
5,492,531	-				+0.2