Strain Fitness in Pseudomonas simiae WCS417 around PS417_25335

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,484,745	-				-0.6
5,484,756	+				-1.0
5,484,756	+				-0.2
5,484,846	-				-1.1
5,484,856	+				+0.1
5,484,857	-				+0.0
5,484,857	-				-3.4
5,484,897	+				-0.6
5,485,173	+		PS417_25330	0.30	-1.3
5,485,231	-		PS417_25330	0.37	+0.7
5,485,349	+		PS417_25330	0.53	+2.0
5,485,349	+		PS417_25330	0.53	+1.6
5,485,350	-		PS417_25330	0.53	-0.2
5,485,350	-		PS417_25330	0.53	+2.1
5,485,372	+		PS417_25330	0.56	+0.2
5,485,372	+		PS417_25330	0.56	+1.8
5,485,372	+		PS417_25330	0.56	+0.2
5,485,372	+		PS417_25330	0.56	+1.0
5,485,372	+		PS417_25330	0.56	+1.5
5,485,372	+		PS417_25330	0.56	+0.2
5,485,373	-		PS417_25330	0.56	-0.3
5,485,373	-		PS417_25330	0.56	+1.0
5,485,373	-		PS417_25330	0.56	-0.1
5,485,373	-		PS417_25330	0.56	+0.3
5,485,427	-		PS417_25330	0.63	-0.0
5,485,618	-		PS417_25330	0.87	+1.7
5,485,618	-		PS417_25330	0.87	+0.6
5,485,647	-				+1.0
5,485,647	-				-0.2
5,485,691	-				-0.8
5,485,714	+				-1.0
5,485,714	+				-2.6
5,485,715	-				+0.4
5,485,735	+				+0.8
5,485,735	+				-0.5
5,485,735	+				+1.2
5,485,735	+				-0.3
5,485,735	+				-2.9
5,485,736	-				+0.4
5,485,736	-				+2.0
5,485,736	-				-1.2
5,485,736	-				+0.3
5,485,736	-				-0.2
5,485,784	+				+0.2
5,485,835	+				-2.1
5,485,835	+				+1.0
5,485,971	+		PS417_25335	0.20	+1.8
5,486,229	+		PS417_25335	0.41	-1.4
5,486,230	-		PS417_25335	0.41	+0.2
5,486,232	+		PS417_25335	0.41	-1.4
5,486,232	+		PS417_25335	0.41	+0.6
5,486,233	-		PS417_25335	0.41	-0.2
5,486,233	-		PS417_25335	0.41	-0.8
5,486,388	+		PS417_25335	0.53	-0.6
5,486,388	+		PS417_25335	0.53	+0.1
5,486,388	+		PS417_25335	0.53	+0.3
5,486,388	+		PS417_25335	0.53	+0.2
5,486,389	-		PS417_25335	0.53	-2.0
5,486,389	-		PS417_25335	0.53	+1.1
5,486,389	-		PS417_25335	0.53	+0.8
5,486,389	-		PS417_25335	0.53	+0.2
5,486,417	+		PS417_25335	0.56	-3.0
5,486,417	+		PS417_25335	0.56	+0.3
5,486,417	+		PS417_25335	0.56	+0.1
5,486,417	+		PS417_25335	0.56	-1.9
5,486,417	+		PS417_25335	0.56	+0.9
5,486,417	+		PS417_25335	0.56	+0.3
5,486,417	+		PS417_25335	0.56	-1.1
5,486,417	+		PS417_25335	0.56	-4.2
5,486,417	+		PS417_25335	0.56	+0.4
5,486,418	-		PS417_25335	0.56	-0.1
5,486,418	-		PS417_25335	0.56	-0.7
5,486,418	-		PS417_25335	0.56	-1.4
5,486,418	-		PS417_25335	0.56	-3.1
5,486,418	-		PS417_25335	0.56	-0.2
5,486,419	+		PS417_25335	0.56	-0.1
5,486,469	-		PS417_25335	0.60	+1.5
5,486,600	+		PS417_25335	0.70	+0.5
5,486,600	+		PS417_25335	0.70	-0.9
5,486,600	+		PS417_25335	0.70	-0.1
5,486,780	+		PS417_25335	0.84	-0.6
5,486,796	+		PS417_25335	0.86	-1.0
5,487,186	+		PS417_25340	0.23	-0.9
5,487,186	+		PS417_25340	0.23	-0.1
5,487,186	+				-0.5
5,487,187	-		PS417_25340	0.23	-2.5
5,487,187	-		PS417_25340	0.23	+1.6
5,487,241	-		PS417_25340	0.29	-0.4
5,487,329	+		PS417_25340	0.38	-1.9
5,487,376	-		PS417_25340	0.43	-3.6
5,487,495	+		PS417_25340	0.56	-1.4
5,487,499	+		PS417_25340	0.56	-0.5
5,487,752	+		PS417_25340	0.83	-1.7
5,487,790	+		PS417_25340	0.87	-1.7
5,487,790	+		PS417_25340	0.87	-1.9
5,487,791	-		PS417_25340	0.87	-0.4
5,487,822	+				-1.1
5,487,823	-				-0.2
5,487,823	-				-1.1
5,487,823	-				+0.0
5,487,828	-				+0.5
5,487,828	-				+1.3
5,487,828	-				+1.9
5,487,858	+				+0.5
5,487,858	+				+0.7
5,487,858	+				+0.2
5,487,859	-				-0.5
5,487,859	-				+0.2
5,487,859	-				+0.8
5,487,859	-				+0.4
5,487,920	+				-0.1