Strain Fitness in Pseudomonas simiae WCS417 around PS417_25225

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,466,655	-				-0.9
5,466,933	+		PS417_25220	0.36	-0.2
5,466,936	-		PS417_25220	0.37	+0.3
5,466,936	-		PS417_25220	0.37	-1.4
5,466,953	-		PS417_25220	0.39	-0.8
5,467,107	+		PS417_25220	0.58	+0.3
5,467,213	+		PS417_25220	0.72	-0.9
5,467,438	-				-0.3
5,467,462	+				+2.3
5,467,462	+				-0.6
5,467,463	-				-0.9
5,467,463	-				-1.9
5,467,658	+		PS417_25225	0.54	+0.8
5,467,658	+		PS417_25225	0.54	-2.3
5,467,802	-		PS417_25225	0.88	-2.3
5,468,505	+				-0.5
5,468,506	-				+1.3
5,468,548	+				-3.2
5,468,587	-				-1.4
5,468,587	-				-0.7
5,468,591	-				+0.2
5,468,616	+				+2.6
5,468,616	+				-0.6
5,468,617	-				-1.2
5,468,617	-				-1.7
5,468,617	-				+1.4
5,468,700	-				+0.8
5,468,700	-		PS417_25235	0.12	-0.8
5,468,745	+		PS417_25235	0.18	+0.4
5,468,745	+		PS417_25235	0.18	+0.6
5,468,745	+		PS417_25235	0.18	-1.2
5,468,745	+		PS417_25235	0.18	+1.0
5,468,745	+		PS417_25235	0.18	+0.2
5,468,746	-		PS417_25235	0.18	+0.2
5,468,811	+		PS417_25235	0.27	-1.4
5,468,812	-		PS417_25235	0.27	+1.1
5,468,812	-		PS417_25235	0.27	-1.5
5,468,838	+		PS417_25235	0.31	-1.1
5,468,839	-		PS417_25235	0.31	+1.2
5,468,839	-		PS417_25235	0.31	-0.2