Strain Fitness in Pseudomonas simiae WCS417 around PS417_25105

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,442,902	-		PS417_25100	0.33	-1.9
5,443,055	-		PS417_25100	0.44	+0.8
5,443,160	+		PS417_25100	0.52	-0.5
5,443,161	-		PS417_25100	0.52	+0.0
5,443,161	-		PS417_25100	0.52	-2.7
5,443,161	-		PS417_25100	0.52	-0.6
5,443,172	-		PS417_25100	0.53	-1.2
5,443,205	+		PS417_25100	0.55	+0.9
5,443,205	+		PS417_25100	0.55	-1.2
5,443,206	-		PS417_25100	0.55	+1.0
5,443,206	-		PS417_25100	0.55	-1.0
5,443,206	-		PS417_25100	0.55	-1.9
5,443,230	+		PS417_25100	0.57	-1.4
5,443,231	-		PS417_25100	0.57	-0.8
5,443,254	+		PS417_25100	0.59	-2.1
5,443,293	+		PS417_25100	0.62	-2.1
5,443,293	+		PS417_25100	0.62	-0.2
5,443,294	-		PS417_25100	0.62	-0.7
5,443,400	+		PS417_25100	0.69	+0.2
5,443,450	+		PS417_25100	0.73	+0.3
5,443,450	+		PS417_25100	0.73	-0.1
5,443,451	-		PS417_25100	0.73	-0.2
5,443,451	-		PS417_25100	0.73	-1.5
5,443,451	-		PS417_25100	0.73	-0.4
5,443,451	-		PS417_25100	0.73	-0.0
5,443,454	+		PS417_25100	0.73	+0.6
5,443,454	+		PS417_25100	0.73	-1.1
5,443,454	+		PS417_25100	0.73	-0.8
5,443,454	+		PS417_25100	0.73	-0.1
5,443,454	+		PS417_25100	0.73	-0.9
5,443,454	+		PS417_25100	0.73	+0.8
5,443,454	+		PS417_25100	0.73	+0.8
5,443,454	+		PS417_25100	0.73	-0.3
5,443,455	-		PS417_25100	0.73	-0.1
5,443,455	-		PS417_25100	0.73	-1.6
5,443,455	-		PS417_25100	0.73	-0.9
5,443,455	-		PS417_25100	0.73	-0.5
5,443,455	-		PS417_25100	0.73	-0.2
5,443,455	-		PS417_25100	0.73	-2.0
5,443,455	-		PS417_25100	0.73	-0.3
5,443,455	-		PS417_25100	0.73	-1.2
5,443,455	-		PS417_25100	0.73	+0.3
5,443,455	-		PS417_25100	0.73	-1.5
5,443,456	+		PS417_25100	0.73	-0.4
5,443,456	+		PS417_25100	0.73	-1.0
5,443,456	+		PS417_25100	0.73	+0.1
5,443,456	+		PS417_25100	0.73	+0.8
5,443,457	-		PS417_25100	0.73	-1.4
5,443,457	-		PS417_25100	0.73	+0.5
5,443,457	-		PS417_25100	0.73	-2.0
5,443,501	+		PS417_25100	0.77	-0.7
5,443,501	+		PS417_25100	0.77	+0.1
5,443,501	+		PS417_25100	0.77	-0.2
5,443,501	+		PS417_25100	0.77	+2.5
5,443,501	+		PS417_25100	0.77	+0.9
5,443,502	-		PS417_25100	0.77	+0.5
5,443,502	-		PS417_25100	0.77	+0.6
5,443,518	-		PS417_25100	0.78	-2.8
5,443,580	+		PS417_25100	0.82	-2.0
5,443,581	-		PS417_25100	0.82	+1.7
5,443,581	-		PS417_25100	0.82	+0.0
5,443,591	+		PS417_25100	0.83	-1.0
5,443,625	+		PS417_25100	0.85	-2.3
5,443,625	+		PS417_25100	0.85	+1.4
5,443,643	+		PS417_25100	0.87	-2.5
5,443,644	-		PS417_25100	0.87	-0.8
5,443,715	+				+0.5
5,443,722	+				-1.2
5,443,722	+				+0.5
5,443,723	-				-1.4
5,443,828	+				-1.2
5,443,828	+				+1.4
5,443,927	-		PS417_25105	0.13	-2.9
5,443,927	-		PS417_25105	0.13	-1.2
5,443,930	+		PS417_25105	0.14	-0.6
5,443,930	+		PS417_25105	0.14	-1.4
5,444,017	+		PS417_25105	0.26	+0.1
5,444,017	+		PS417_25105	0.26	+0.1
5,444,017	+		PS417_25105	0.26	-2.4
5,444,017	+		PS417_25105	0.26	+0.8
5,444,018	-		PS417_25105	0.26	-2.5
5,444,018	-				-0.8
5,444,018	-		PS417_25105	0.26	-3.3
5,444,084	+		PS417_25105	0.35	+0.2
5,444,084	+		PS417_25105	0.35	-0.3
5,444,085	-		PS417_25105	0.35	-1.5
5,444,085	-		PS417_25105	0.35	-3.9
5,444,085	-		PS417_25105	0.35	-2.7
5,444,340	+		PS417_25105	0.69	+0.2
5,444,350	-		PS417_25105	0.71	-1.4
5,444,483	+		PS417_25105	0.89	+0.6
5,444,483	+		PS417_25105	0.89	-0.3
5,444,483	+		PS417_25105	0.89	-0.3
5,444,955	-		PS417_25110	0.54	-0.8
5,444,993	+		PS417_25110	0.59	+0.3
5,444,993	+		PS417_25110	0.59	+2.0
5,444,993	+		PS417_25110	0.59	+0.3
5,444,994	-		PS417_25110	0.59	-3.2
5,445,139	+		PS417_25110	0.79	-0.9
5,445,139	+		PS417_25110	0.79	-0.9
5,445,172	+		PS417_25110	0.84	-0.8
5,445,172	+		PS417_25110	0.84	-1.0
5,445,172	+		PS417_25110	0.84	+0.0
5,445,328	+				-0.9
5,445,337	+				+0.0
5,445,484	+				+0.1
5,445,484	+				+0.8
5,445,484	+				+0.8
5,445,484	+				+0.2
5,445,485	-				-1.2
5,445,485	-				-2.1
5,445,485	-				-3.3
5,445,485	-				-0.7
5,445,485	-				-0.3
5,445,485	-				-2.3
5,445,502	+				+0.9
5,445,503	-				-2.7