Strain Fitness in Pseudomonas simiae WCS417 around PS417_24355

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,285,222	-				-0.2
5,285,222	-		PS417_24350	0.79	-2.1
5,285,291	-		PS417_24350	0.84	+0.6
5,285,419	+				+1.2
5,285,420	-				+0.4
5,285,499	+				+1.1
5,285,519	+				+2.0
5,285,519	+				+0.3
5,285,541	+				-1.5
5,285,700	-				-0.7
5,285,780	+				+1.8
5,285,780	+				-0.8
5,285,781	-				-1.0
5,285,801	-				+1.8
5,285,959	+				-2.7
5,285,960	-				-2.2
5,286,358	+		PS417_24355	0.42	-0.5
5,286,359	-		PS417_24355	0.42	-2.0
5,286,379	+		PS417_24355	0.44	-2.9
5,286,380	-		PS417_24355	0.44	+0.0
5,287,075	+				-3.7
5,287,090	-				+0.0
5,287,090	-				-3.4
5,287,110	+				+1.5
5,287,110	+				+0.1
5,287,111	-				-0.7
5,287,111	-				+1.8
5,287,111	-				-2.1
5,287,293	+				+1.3
5,287,293	+				+2.0
5,287,462	-		PS417_24360	0.10	+0.4
5,287,671	+		PS417_24360	0.20	+0.1
5,287,672	-		PS417_24360	0.20	-1.4
5,288,022	+		PS417_24360	0.36	-0.2
5,288,023	-		PS417_24360	0.36	+0.6