Strain Fitness in Pseudomonas simiae WCS417 around PS417_24200

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,247,940	+		PS417_24190	0.88	+0.1
5,247,941	-		PS417_24190	0.88	-1.1
5,247,941	-		PS417_24190	0.88	+0.9
5,247,941	-		PS417_24190	0.88	-0.6
5,247,941	-		PS417_24190	0.88	+1.0
5,247,941	-		PS417_24190	0.88	-1.8
5,247,941	-		PS417_24190	0.88	-0.2
5,247,941	-		PS417_24190	0.88	-1.5
5,248,043	+				+0.2
5,248,044	-				+0.7
5,248,057	+				+1.2
5,248,058	-				-0.0
5,248,069	+				+1.2
5,248,070	-				+0.2
5,248,112	+				+0.8
5,248,140	-				+0.7
5,248,161	-				-2.3
5,248,161	-				-0.2
5,248,166	-				-0.9
5,248,200	+				+0.8
5,248,209	+				+0.8
5,248,210	-				+1.4
5,248,262	+		PS417_24195	0.11	-2.8
5,248,263	-		PS417_24195	0.11	-0.6
5,248,264	+		PS417_24195	0.11	-1.4
5,248,264	+		PS417_24195	0.11	-0.2
5,248,265	-		PS417_24195	0.12	-2.3
5,248,270	+		PS417_24195	0.13	-0.7
5,248,270	+		PS417_24195	0.13	+2.5
5,248,270	+		PS417_24195	0.13	-1.5
5,248,375	+		PS417_24195	0.32	+1.2
5,248,375	+		PS417_24195	0.32	-2.5
5,248,375	+		PS417_24195	0.32	+0.7
5,248,376	-		PS417_24195	0.32	-2.4
5,248,376	-		PS417_24195	0.32	+0.4
5,248,376	-		PS417_24195	0.32	+0.0
5,248,376	-		PS417_24195	0.32	+0.5
5,248,376	-		PS417_24195	0.32	+0.3
5,248,376	-		PS417_24195	0.32	+0.3
5,248,431	-		PS417_24195	0.42	-0.1
5,248,476	-		PS417_24195	0.50	+1.6
5,248,476	-		PS417_24195	0.50	-0.2
5,248,476	-		PS417_24195	0.50	+0.7
5,248,588	+		PS417_24195	0.70	+2.3
5,248,667	-		PS417_24195	0.85	+0.9
5,248,667	-		PS417_24195	0.85	-0.1
5,248,747	+				+0.5
5,248,779	+				-0.9
5,248,780	-				+1.4
5,248,780	-				+0.3
5,248,802	-				+0.8
5,248,815	-				+0.7
5,248,815	-				-2.7
5,248,838	+				-2.7
5,248,975	+				+0.4
5,248,984	-		PS417_24200	0.21	-2.6
5,248,987	-		PS417_24200	0.21	-1.6
5,248,990	-		PS417_24200	0.22	-0.1
5,248,990	-		PS417_24200	0.22	-1.2
5,248,990	-		PS417_24200	0.22	-0.8
5,249,064	-		PS417_24200	0.39	-1.1
5,249,118	+		PS417_24200	0.51	+1.4
5,249,119	-		PS417_24200	0.51	-0.3
5,249,187	-		PS417_24200	0.67	-2.7
5,249,224	+		PS417_24200	0.75	-2.4
5,249,307	+				+0.4
5,249,307	+				+0.8
5,249,377	-				-1.0
5,249,409	-				+0.0
5,249,409	-				+1.7
5,249,409	-				+0.7
5,249,603	+		PS417_24205	0.10	+0.3
5,249,643	+		PS417_24205	0.14	+0.7
5,249,643	+		PS417_24205	0.14	+0.5
5,249,647	-		PS417_24205	0.14	+0.7
5,249,649	+		PS417_24205	0.15	-2.5
5,249,649	+		PS417_24205	0.15	+0.4
5,249,650	-		PS417_24205	0.15	-0.1
5,249,650	-		PS417_24205	0.15	-0.4
5,249,758	+		PS417_24205	0.25	-0.1
5,249,758	+		PS417_24205	0.25	+0.3
5,249,758	+		PS417_24205	0.25	-2.4
5,249,758	+		PS417_24205	0.25	-0.8
5,249,759	-		PS417_24205	0.25	-2.8
5,249,850	+		PS417_24205	0.34	-0.2
5,249,850	+		PS417_24205	0.34	+1.9
5,249,850	+		PS417_24205	0.34	-0.2
5,249,850	+		PS417_24205	0.34	+0.8
5,249,851	-		PS417_24205	0.34	+1.4
5,249,851	-		PS417_24205	0.34	+0.9
5,249,920	-		PS417_24205	0.41	-1.0
5,249,920	-		PS417_24205	0.41	-1.4
5,249,984	+		PS417_24205	0.47	-2.9
5,250,042	+		PS417_24205	0.53	-2.2
5,250,043	-		PS417_24205	0.53	-0.9
5,250,045	-		PS417_24205	0.53	-0.1
5,250,114	+		PS417_24205	0.60	+1.1
5,250,115	-		PS417_24205	0.60	+0.5
5,250,273	+		PS417_24205	0.75	-1.5