Strain Fitness in Pseudomonas simiae WCS417 around PS417_23115

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,009,641	+				-0.5
5,009,641	+		PS417_23110	0.52	-1.3
5,009,641	+		PS417_23110	0.52	+0.1
5,009,642	-		PS417_23110	0.52	+1.5
5,009,642	-		PS417_23110	0.52	-3.2
5,009,642	-		PS417_23110	0.52	-2.0
5,009,642	-		PS417_23110	0.52	+0.1
5,010,050	-		PS417_23110	0.76	+0.9
5,010,070	+		PS417_23110	0.78	+0.7
5,010,084	+		PS417_23110	0.79	-0.1
5,010,259	+		PS417_23110	0.89	+0.7
5,010,259	+		PS417_23110	0.89	+0.2
5,010,259	+		PS417_23110	0.89	-0.1
5,010,308	-				-0.5
5,010,458	+				+0.0
5,010,502	-				+0.1
5,010,561	+				+0.6
5,010,638	+				-0.0
5,010,829	+		PS417_23115	0.26	+0.8
5,010,829	+		PS417_23115	0.26	+0.3
5,010,965	-		PS417_23115	0.43	+1.6
5,011,174	+		PS417_23115	0.70	+0.8
5,011,175	-		PS417_23115	0.70	+0.2
5,011,216	+		PS417_23115	0.75	-0.3
5,011,412	+				+0.4
5,011,497	+				+1.2
5,011,590	+		PS417_23120	0.17	+0.2
5,011,609	-		PS417_23120	0.18	+0.1
5,011,628	-		PS417_23120	0.20	-2.0
5,011,776	+		PS417_23120	0.33	-0.5
5,011,776	+		PS417_23120	0.33	-0.6
5,011,776	+		PS417_23120	0.33	-1.2
5,011,777	-		PS417_23120	0.33	+0.0
5,011,777	-		PS417_23120	0.33	+0.1
5,011,827	+		PS417_23120	0.37	+0.2
5,011,828	-		PS417_23120	0.37	-3.5
5,011,854	+		PS417_23120	0.40	-2.3
5,011,854	+		PS417_23120	0.40	-0.2
5,011,855	-		PS417_23120	0.40	-2.1
5,011,940	+		PS417_23120	0.47	-0.2
5,011,974	+		PS417_23120	0.50	-0.6
5,011,974	+		PS417_23120	0.50	+0.3
5,011,975	-		PS417_23120	0.50	+0.1
5,012,184	+		PS417_23120	0.68	-0.3
5,012,184	+		PS417_23120	0.68	-2.2
5,012,184	+		PS417_23120	0.68	-0.3
5,012,185	-		PS417_23120	0.68	-0.0
5,012,185	-		PS417_23120	0.68	-1.8
5,012,185	-		PS417_23120	0.68	+0.1
5,012,185	-		PS417_23120	0.68	+1.1
5,012,185	-		PS417_23120	0.68	-1.2
5,012,193	+		PS417_23120	0.69	+0.5
5,012,194	-		PS417_23120	0.69	+1.7