Strain Fitness in Pseudomonas simiae WCS417 around PS417_22375

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,848,501	+		PS417_22370	0.49	-0.5
4,848,501	+		PS417_22370	0.49	-2.3
4,848,501	+		PS417_22370	0.49	-0.7
4,848,501	+		PS417_22370	0.49	+0.5
4,848,501	+				+1.7
4,848,501	+		PS417_22370	0.49	-0.7
4,848,502	-		PS417_22370	0.49	+0.2
4,848,502	-		PS417_22370	0.49	+1.7
4,848,502	-		PS417_22370	0.49	+0.1
4,848,502	-		PS417_22370	0.49	-0.4
4,848,502	-		PS417_22370	0.49	-0.5
4,848,502	-		PS417_22370	0.49	-1.7
4,848,502	-		PS417_22370	0.49	+0.2
4,848,663	+		PS417_22370	0.64	-1.3
4,848,821	-		PS417_22370	0.78	-1.1
4,848,951	+		PS417_22370	0.89	-0.8
4,849,027	+				+4.2
4,849,028	-				-1.4
4,849,028	-				-3.4
4,849,031	+				-0.6
4,849,057	-				-1.2
4,849,085	-				-1.3
4,849,088	+				+1.4
4,849,176	+				-2.1
4,849,176	+				-0.4
4,849,177	-				+0.9
4,849,235	+				-4.5
4,849,293	+				-0.0
4,849,347	-				-2.4
4,849,355	+				-1.7
4,849,355	+				+0.2
4,849,355	+				+0.3
4,849,356	-				+1.4
4,849,356	-				-0.3
4,849,356	-				-0.8
4,849,356	-				-2.8
4,849,364	+				-0.7
4,849,364	+				+2.6
4,849,364	+				+0.3
4,849,364	+				+0.8
4,849,364	+				+0.1
4,849,364	+				+0.1
4,849,365	-				-0.1
4,849,365	-				+1.1
4,849,365	-				+0.0
4,849,385	+				-0.3
4,849,457	+				-0.9
4,849,523	+		PS417_22375	0.28	-1.6
4,849,660	+				+0.8
4,849,724	+				+0.7
4,849,740	+				+0.3
4,849,740	+				-0.8
4,849,847	+		PS417_22380	0.15	+0.8
4,849,847	+		PS417_22380	0.15	-1.0
4,849,848	-		PS417_22380	0.16	-3.0
4,849,895	+		PS417_22380	0.25	-1.7
4,850,170	+		PS417_22380	0.81	-2.0
4,850,216	+				+0.4
4,850,216	+				-0.8
4,850,258	+				-0.7
4,850,440	+		PS417_22385	0.10	+0.7
4,850,440	+		PS417_22385	0.10	+0.4
4,850,441	-		PS417_22385	0.10	-0.9
4,850,670	-		PS417_22385	0.32	-0.4
4,850,670	-		PS417_22385	0.32	+1.0
4,850,670	-		PS417_22385	0.32	-0.6