Strain Fitness in Pseudomonas simiae WCS417 around PS417_22120

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,791,796	+		PS417_22115	0.82	+1.5
4,791,796	+		PS417_22115	0.82	+1.6
4,791,796	+		PS417_22115	0.82	+0.7
4,791,796	+		PS417_22115	0.82	-0.1
4,791,796	+		PS417_22115	0.82	-2.1
4,791,797	-		PS417_22115	0.82	+0.9
4,791,797	-		PS417_22115	0.82	-0.5
4,791,964	+				+4.8
4,791,965	-				-0.4
4,791,965	-				-2.5
4,792,025	-				+0.1
4,792,027	+				+0.0
4,792,028	-				+0.4
4,792,028	-				-1.4
4,792,034	+				+2.6
4,792,034	+				-0.7
4,792,123	+				-0.5
4,792,202	-		PS417_22120	0.12	-1.3
4,792,434	-		PS417_22120	0.40	-1.4
4,792,462	-		PS417_22120	0.43	-0.5
4,792,599	-		PS417_22120	0.59	+0.1
4,792,599	-		PS417_22120	0.59	-0.4
4,792,695	+		PS417_22120	0.71	-0.8
4,792,959	+				+0.8
4,792,960	-				+1.2
4,793,121	+				+0.3
4,793,121	+				-0.2
4,793,122	-				-1.9
4,793,169	+				+0.4
4,793,169	+				+0.5
4,793,211	+		PS417_22125	0.12	+1.0
4,793,349	+		PS417_22125	0.23	-0.1
4,793,370	+		PS417_22125	0.24	-1.4
4,793,370	+		PS417_22125	0.24	+0.2
4,793,370	+		PS417_22125	0.24	+2.5
4,793,370	+		PS417_22125	0.24	+1.6
4,793,370	+		PS417_22125	0.24	-1.7
4,793,371	-		PS417_22125	0.24	-1.7
4,793,371	-		PS417_22125	0.24	-1.5
4,793,371	-		PS417_22125	0.24	-0.3
4,793,586	+		PS417_22125	0.40	+0.2
4,793,586	+		PS417_22125	0.40	-2.8
4,793,586	+		PS417_22125	0.40	+3.2
4,793,587	-		PS417_22125	0.40	-0.4
4,793,587	-		PS417_22125	0.40	+1.6
4,793,727	+		PS417_22125	0.51	-1.0
4,793,727	+		PS417_22125	0.51	-1.3
4,793,745	+		PS417_22125	0.52	-0.2
4,793,767	-		PS417_22125	0.54	+1.2
4,793,767	-		PS417_22125	0.54	-1.8
4,793,820	+		PS417_22125	0.58	+0.2
4,793,820	+		PS417_22125	0.58	+1.2
4,793,821	-		PS417_22125	0.58	-2.5
4,793,824	+		PS417_22125	0.58	+0.1
4,793,824	+		PS417_22125	0.58	-3.0
4,793,824	+		PS417_22125	0.58	-1.4