Strain Fitness in Pseudomonas simiae WCS417 around PS417_21715

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,710,220	-		PS417_21710	0.57	+0.8
4,710,222	-		PS417_21710	0.58	-0.7
4,710,270	-		PS417_21710	0.62	-1.4
4,710,270	-		PS417_21710	0.62	-1.8
4,710,270	-		PS417_21710	0.62	-2.1
4,710,632	-				-1.5
4,710,678	-				-1.5
4,710,678	-				-2.4
4,710,681	+				-0.5
4,710,682	-				-1.5
4,710,794	+				-2.5
4,710,794	+				-0.7
4,710,795	-				-0.3
4,710,840	-				+0.0
4,710,840	-				+0.5
4,710,870	-				+0.6
4,710,958	+				-0.4
4,710,958	+				-0.5
4,710,974	-				-1.8
4,710,977	+				+0.8
4,710,977	+				+0.9
4,710,977	+				-0.8
4,710,977	+				-0.1
4,710,978	-				+0.2
4,710,981	+				-2.9
4,710,982	-				-0.1
4,710,982	-				-1.9
4,711,014	-				-2.6
4,711,014	-				+1.1
4,711,042	-				-1.0
4,711,381	+				+0.5
4,711,382	-				-0.8
4,711,382	-				+0.9
4,711,393	+				-1.2
4,711,393	+				+2.6
4,711,393	+				-0.7
4,711,395	+				-0.2
4,711,395	+				-3.6
4,711,395	+				+0.5
4,711,396	-				-1.9
4,711,634	-				-1.4
4,711,850	-		PS417_21715	0.14	+1.9
4,711,850	-		PS417_21715	0.14	+0.3
4,711,939	+		PS417_21715	0.15	-1.8
4,711,939	+		PS417_21715	0.15	+1.6
4,711,940	-		PS417_21715	0.15	+2.3
4,711,940	-		PS417_21715	0.15	+0.5
4,711,940	-		PS417_21715	0.15	+1.9
4,711,940	-		PS417_21715	0.15	-0.0
4,711,940	-		PS417_21715	0.15	+1.8
4,711,940	-				+1.8
4,712,585	+		PS417_21715	0.26	+0.8
4,712,586	-		PS417_21715	0.26	+0.3
4,712,740	+		PS417_21715	0.29	-0.7
4,712,740	+		PS417_21715	0.29	+0.1
4,712,740	+		PS417_21715	0.29	-0.7
4,712,740	+		PS417_21715	0.29	+1.9
4,712,816	-		PS417_21715	0.30	-0.5
4,712,816	-		PS417_21715	0.30	+0.9
4,712,946	+		PS417_21715	0.32	-0.7
4,712,946	+		PS417_21715	0.32	+0.1
4,712,946	+		PS417_21715	0.32	-0.5
4,713,028	+		PS417_21715	0.33	-1.7
4,713,028	+		PS417_21715	0.33	+0.4
4,713,028	+		PS417_21715	0.33	+0.2
4,713,028	+		PS417_21715	0.33	-1.3
4,713,029	-		PS417_21715	0.33	-2.1
4,713,029	-		PS417_21715	0.33	+0.5
4,713,029	-		PS417_21715	0.33	+0.2
4,713,287	+		PS417_21715	0.38	+2.0
4,713,287	+		PS417_21715	0.38	-0.1
4,713,287	+		PS417_21715	0.38	-0.6
4,713,288	-		PS417_21715	0.38	-1.3
4,713,288	-		PS417_21715	0.38	-0.7
4,713,527	+		PS417_21715	0.42	+0.0
4,713,528	-		PS417_21715	0.42	-0.0
4,713,528	-		PS417_21715	0.42	+0.5
4,713,528	-		PS417_21715	0.42	-2.6
4,713,682	+		PS417_21715	0.45	+0.4
4,713,683	-		PS417_21715	0.45	-0.5
4,713,694	+		PS417_21715	0.45	+0.6
4,713,694	+		PS417_21715	0.45	-0.7
4,713,694	+		PS417_21715	0.45	-2.5
4,713,887	-		PS417_21715	0.48	-1.4
4,713,934	+		PS417_21715	0.49	+1.9
4,714,011	-		PS417_21715	0.50	-1.4
4,714,132	+		PS417_21715	0.52	-2.9
4,714,376	-		PS417_21715	0.56	+0.2
4,714,421	+		PS417_21715	0.57	+0.5
4,714,503	+		PS417_21715	0.58	-1.0
4,714,503	+		PS417_21715	0.58	-0.8
4,714,504	-		PS417_21715	0.58	+0.8
4,714,548	+		PS417_21715	0.59	-2.4
4,714,761	+		PS417_21715	0.63	+0.5
4,714,761	+		PS417_21715	0.63	-1.2
4,714,761	+		PS417_21715	0.63	+1.2
4,714,762	-		PS417_21715	0.63	-0.2
4,714,767	+		PS417_21715	0.63	+1.4
4,714,767	+				-2.5
4,714,768	-		PS417_21715	0.63	-1.0
4,714,789	+		PS417_21715	0.63	-0.2
4,714,790	-		PS417_21715	0.63	+0.6
4,714,790	-		PS417_21715	0.63	-1.2
4,715,044	+		PS417_21715	0.68	-0.0
4,715,066	-		PS417_21715	0.68	-3.2
4,715,241	+		PS417_21715	0.71	+0.5
4,715,526	-		PS417_21715	0.76	-1.0
4,715,733	+		PS417_21715	0.79	-0.1
4,715,733	+		PS417_21715	0.79	+1.6
4,715,734	-		PS417_21715	0.79	+1.5
4,716,110	-		PS417_21715	0.86	+0.1
4,716,131	+		PS417_21715	0.86	+1.7
4,716,131	+		PS417_21715	0.86	+1.4
4,716,132	-		PS417_21715	0.86	+1.8
4,716,307	-		PS417_21715	0.89	-0.5
4,716,386	+				+0.1
4,716,387	-				+1.1
4,716,595	+				-0.4
4,716,667	+				-0.5
4,716,862	+				+1.9
4,716,863	-				+0.7
4,716,863	-				+0.4
4,716,863	-				-0.3
4,716,865	+				-0.4
4,716,866	-				-0.8
4,716,866	-				-4.2
4,716,964	+				-1.2
4,716,965	-				+0.8
4,716,965	-				+1.0
4,716,965	-				-0.4