Strain Fitness in Pseudomonas simiae WCS417 around PS417_21245

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,618,656	+				+0.2
4,618,656	+				-0.1
4,618,657	-				-0.3
4,618,709	+				-2.7
4,618,709	+				+0.2
4,618,709	+				+2.7
4,618,709	+				-0.7
4,618,709	+				+0.1
4,618,709	+				+0.7
4,618,710	-				-0.2
4,618,710	-				-1.2
4,618,710	-				-0.6
4,618,973	+		PS417_21240	0.30	+0.1
4,618,985	+		PS417_21240	0.32	-0.3
4,619,030	+		PS417_21240	0.36	-1.2
4,619,033	+		PS417_21240	0.37	-0.3
4,619,033	+		PS417_21240	0.37	-0.1
4,619,034	-		PS417_21240	0.37	-0.8
4,619,183	+		PS417_21240	0.52	-2.3
4,619,218	+		PS417_21240	0.56	-0.0
4,619,375	+		PS417_21240	0.73	+2.3
4,619,375	+		PS417_21240	0.73	+2.2
4,619,375	+		PS417_21240	0.73	+1.5
4,619,375	+		PS417_21240	0.73	+1.8
4,619,376	-		PS417_21240	0.73	+0.3
4,619,546	+				+0.3
4,619,547	-				+1.3
4,619,626	-				+0.5
4,619,856	+		PS417_21245	0.15	+0.1
4,619,856	+		PS417_21245	0.15	-1.9
4,619,856	+		PS417_21245	0.15	-1.2
4,619,856	+				+3.4
4,619,856	+		PS417_21245	0.15	-0.6
4,619,857	-		PS417_21245	0.15	+0.8
4,619,857	-		PS417_21245	0.15	+0.1
4,620,243	+		PS417_21245	0.43	-1.1
4,620,243	+		PS417_21245	0.43	-0.4
4,620,244	-		PS417_21245	0.43	+1.1
4,620,526	+		PS417_21245	0.63	+0.1
4,620,526	+		PS417_21245	0.63	-0.0
4,620,526	+		PS417_21245	0.63	-0.2
4,620,527	-		PS417_21245	0.63	-0.2
4,620,527	-		PS417_21245	0.63	+0.1
4,620,543	+		PS417_21245	0.64	-0.1
4,620,543	+		PS417_21245	0.64	+0.8
4,620,543	+		PS417_21245	0.64	+1.6
4,620,544	-		PS417_21245	0.64	-1.9
4,620,544	-		PS417_21245	0.64	-1.7
4,620,544	-		PS417_21245	0.64	+0.5
4,620,544	-		PS417_21245	0.64	-2.8
4,620,588	+		PS417_21245	0.67	-2.1
4,620,588	+		PS417_21245	0.67	-1.8
4,620,588	+		PS417_21245	0.67	+0.3
4,620,588	+		PS417_21245	0.67	+1.6
4,620,589	-		PS417_21245	0.67	-1.5
4,620,589	-		PS417_21245	0.67	+1.8
4,620,589	-		PS417_21245	0.67	-0.7
4,620,608	+		PS417_21245	0.69	-2.4
4,620,609	-		PS417_21245	0.69	-0.2
4,620,637	-		PS417_21245	0.71	-0.5
4,620,679	-		PS417_21245	0.74	-3.9
4,620,826	+		PS417_21245	0.84	-1.7
4,621,020	+				-1.0
4,621,032	+				+1.8
4,621,036	-				-0.4
4,621,036	-				-1.5
4,621,036	-				-0.5
4,621,036	-				+0.6
4,621,228	+				-1.2
4,621,229	-				-1.0
4,621,229	-				-1.7
4,621,299	+				+2.2
4,621,371	+				-1.8
4,621,371	+				-1.6
4,621,372	-				+1.3
4,621,372	-				-2.5
4,621,452	+				-3.2
4,621,453	-				-1.5
4,621,463	+				+2.6
4,621,463	+				+1.9
4,621,463	+				-2.6
4,621,463	+				+0.5
4,621,464	-				-0.4
4,621,561	+		PS417_21250	0.29	-1.1
4,621,561	+		PS417_21250	0.29	-1.0
4,621,561	+				-0.2
4,621,571	+		PS417_21250	0.32	+0.5
4,621,571	+		PS417_21250	0.32	-3.1
4,621,571	+		PS417_21250	0.32	-1.5
4,621,572	-		PS417_21250	0.32	-1.2
4,621,590	+		PS417_21250	0.37	+0.4
4,621,590	+		PS417_21250	0.37	-0.5
4,621,604	+		PS417_21250	0.42	-0.2
4,621,706	+		PS417_21250	0.71	+1.7
4,621,830	-				-1.3
4,621,861	+				-2.9
4,621,877	-				+2.6
4,621,885	-				+1.8
4,621,911	+				-0.4
4,621,911	+				+0.8
4,621,912	-				+1.4
4,621,912	-				+2.3