Strain Fitness in Pseudomonas simiae WCS417 around PS417_20280

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,403,345	-				-0.6
4,403,345	-				+0.3
4,403,345	-				-2.3
4,403,450	+				-1.0
4,403,450	+				-0.6
4,403,451	-				+3.1
4,403,479	-				-2.3
4,403,480	+				+0.5
4,403,481	-				-2.1
4,403,481	-				-4.1
4,403,481	-				+0.2
4,403,633	-		PS417_20280	0.17	-0.9
4,403,633	-		PS417_20280	0.17	-0.0
4,403,765	-		PS417_20280	0.33	-1.4
4,403,880	+		PS417_20280	0.47	-2.6
4,403,884	+		PS417_20280	0.48	-2.3
4,403,884	+		PS417_20280	0.48	-4.3
4,403,885	-		PS417_20280	0.48	+0.8
4,403,885	-				+0.1
4,403,926	+		PS417_20280	0.53	+0.6
4,403,926	+		PS417_20280	0.53	-2.6
4,403,927	-		PS417_20280	0.53	-0.7
4,404,055	+		PS417_20280	0.69	-1.8
4,404,056	-		PS417_20280	0.69	-1.5
4,404,056	-		PS417_20280	0.69	-0.1
4,404,286	+				-0.9
4,404,328	+				-0.2
4,404,329	-				+0.8
4,404,331	+				-0.3
4,404,351	+				-1.3
4,404,351	+				-2.6
4,404,351	+				+0.1
4,404,351	+				+0.3
4,404,352	-				-1.0
4,404,352	-				+0.4
4,404,352	-				+0.8
4,404,352	-				+1.1
4,404,352	-				-1.2
4,404,355	-				-0.3
4,404,610	+				+1.2
4,404,611	-				+0.0
4,404,611	-				+0.7
4,404,861	+				-2.4
4,404,862	-				-2.0
4,404,862	-				+0.2
4,404,862	-				-0.2
4,404,865	+				+0.1
4,404,877	-				+1.3
4,404,916	-		PS417_20285	0.12	+2.5
4,404,920	+		PS417_20285	0.13	-2.6
4,404,921	-		PS417_20285	0.13	-1.4
4,404,921	-		PS417_20285	0.13	-0.1
4,404,997	+		PS417_20285	0.19	+1.0
4,405,052	-		PS417_20285	0.23	+0.1
4,405,090	-		PS417_20285	0.26	-2.1
4,405,118	+		PS417_20285	0.28	-0.2
4,405,118	+		PS417_20285	0.28	+0.3
4,405,118	+		PS417_20285	0.28	+0.8
4,405,118	+		PS417_20285	0.28	+0.2
4,405,118	+		PS417_20285	0.28	-0.3
4,405,119	-		PS417_20285	0.28	-2.2
4,405,121	+		PS417_20285	0.29	+0.4
4,405,122	-		PS417_20285	0.29	+0.2
4,405,188	+		PS417_20285	0.34	-2.8
4,405,242	+		PS417_20285	0.38	+0.2
4,405,295	+		PS417_20285	0.42	-0.4