Strain Fitness in Pseudomonas simiae WCS417 around PS417_19600

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,263,219	+		PS417_19595	0.61	+0.5
4,263,302	+		PS417_19595	0.65	+0.8
4,263,303	-		PS417_19595	0.65	-1.6
4,263,396	-		PS417_19595	0.70	-0.2
4,263,472	-		PS417_19595	0.74	+1.1
4,263,472	-		PS417_19595	0.74	+0.2
4,263,685	+		PS417_19595	0.85	+0.1
4,263,907	+				+1.4
4,263,907	+				+0.7
4,263,908	-				+0.2
4,263,908	-				-1.1
4,263,965	-				-0.3
4,263,975	-				+0.8
4,263,995	-				-1.3
4,264,018	-				-3.1
4,264,051	-				+0.3
4,264,339	+		PS417_19600	0.56	-2.1
4,264,340	-		PS417_19600	0.57	-0.8
4,264,573	+				+1.7
4,264,599	-				-1.2
4,264,625	-				-0.5
4,264,625	-				-0.0
4,264,631	-				-0.6
4,264,725	-				+2.9
4,264,729	+				+0.4
4,264,729	+				-1.0
4,264,730	-				+1.9
4,264,730	-				-0.3
4,264,782	-				+0.5
4,264,782	-				-1.3
4,264,782	-				+0.9
4,264,862	+		PS417_19605	0.35	+0.3
4,264,863	-		PS417_19605	0.35	-2.4
4,265,025	-				-0.1
4,265,115	-				-1.6
4,265,211	-		PS417_19610	0.12	-0.9