Strain Fitness in Pseudomonas simiae WCS417 around PS417_19010

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,113,321	+		PS417_19000	0.85	+1.2
4,113,487	+				-0.5
4,113,488	-				+1.3
4,113,488	-				+0.8
4,113,597	+				+0.2
4,114,316	+				+1.1
4,114,316	+				+0.7
4,114,317	-				+0.7
4,114,317	-				+0.2
4,114,317	-				+0.1
4,114,327	-				+1.5
4,114,327	-				-0.1
4,114,410	-		PS417_19010	0.19	-0.7
4,114,621	-		PS417_19010	0.42	-1.5
4,114,625	+		PS417_19010	0.43	-0.7
4,114,721	+		PS417_19010	0.53	-1.1
4,114,832	+		PS417_19010	0.65	-0.0
4,114,833	-		PS417_19010	0.65	-0.3
4,115,262	-		PS417_19015	0.11	-1.2
4,115,262	-		PS417_19015	0.11	+0.7
4,115,262	-		PS417_19015	0.11	-1.5
4,115,348	+		PS417_19015	0.21	+0.3
4,115,348	+		PS417_19015	0.21	+0.9
4,115,454	-		PS417_19015	0.32	+0.7
4,115,498	+		PS417_19015	0.37	-1.0
4,115,612	+		PS417_19015	0.50	+1.3
4,115,613	-		PS417_19015	0.50	-1.0
4,115,712	-		PS417_19015	0.61	-0.1
4,115,825	-		PS417_19015	0.74	-0.1
4,115,825	-		PS417_19015	0.74	+0.2
4,116,069	+				+0.9
4,116,135	-				+1.1
4,116,135	-				-0.3