Strain Fitness in Pseudomonas simiae WCS417 around PS417_18685

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,055,732	+				-1.4
4,055,732	+				-0.5
4,055,733	-				+4.1
4,055,877	+				+2.4
4,055,877	+				+0.2
4,055,878	-				-0.2
4,055,878	-				+1.3
4,056,612	+		PS417_18685	0.41	+0.3
4,056,612	+		PS417_18685	0.41	-0.5
4,056,612	+		PS417_18685	0.41	+0.1
4,056,613	-		PS417_18685	0.41	+1.2
4,056,613	-		PS417_18685	0.41	+0.2
4,056,613	-		PS417_18685	0.41	+0.1
4,056,613	-		PS417_18685	0.41	+1.0
4,056,755	-		PS417_18685	0.48	-0.1
4,056,756	+		PS417_18685	0.48	+1.2
4,056,756	+		PS417_18685	0.48	-1.2
4,056,757	-		PS417_18685	0.48	+1.4
4,056,757	-		PS417_18685	0.48	+3.2
4,056,757	-		PS417_18685	0.48	+0.6
4,056,826	-		PS417_18685	0.51	+1.2
4,056,826	-		PS417_18685	0.51	+0.5
4,056,832	-		PS417_18685	0.52	+1.6
4,056,832	-		PS417_18685	0.52	+2.2
4,056,832	-		PS417_18685	0.52	+0.9
4,056,832	-		PS417_18685	0.52	+1.3
4,056,833	+		PS417_18685	0.52	+1.5
4,056,833	+		PS417_18685	0.52	+1.2
4,056,833	+		PS417_18685	0.52	+1.5
4,056,834	-		PS417_18685	0.52	-2.1
4,057,063	-		PS417_18685	0.63	-2.5
4,057,077	+				+0.8
4,057,201	-		PS417_18685	0.70	+0.1
4,057,266	+		PS417_18685	0.73	+1.1
4,057,347	+		PS417_18685	0.77	-1.8
4,057,348	-		PS417_18685	0.77	+0.3
4,057,506	+		PS417_18685	0.85	+1.8
4,057,507	-		PS417_18685	0.85	+0.2
4,057,522	-		PS417_18685	0.86	+0.8
4,057,522	-		PS417_18685	0.86	-0.2
4,057,524	+		PS417_18685	0.86	-0.5
4,057,525	-		PS417_18685	0.86	-2.0
4,057,531	-		PS417_18685	0.86	-1.7
4,057,534	-		PS417_18685	0.87	+0.8
4,057,534	-		PS417_18685	0.87	-0.4
4,057,545	+		PS417_18685	0.87	+3.2
4,057,804	+				+0.3
4,057,804	+				-0.4
4,057,804	+				+0.1
4,057,804	+				+0.2
4,057,804	+				+1.9
4,057,805	-				+0.3
4,057,805	-				+0.5
4,057,805	-				-1.2
4,057,809	+				-1.4
4,057,809	+				-0.5
4,057,810	-				-0.2
4,057,810	-				-0.9
4,057,856	-				+0.0
4,057,906	-				+0.8
4,057,906	-				+0.2
4,057,911	+				+0.0
4,057,911	+				+1.4
4,057,912	-				-1.1
4,057,912	-				-0.1
4,057,912	-				+2.7
4,057,912	-				+1.4
4,057,914	-				+1.8
4,057,981	+				+0.8
4,057,981	+				+0.8
4,057,981	+				+1.0
4,057,982	-				-0.3
4,057,982	-				-0.1
4,057,982	-				-0.5
4,058,061	+				+1.2
4,058,063	+				-0.3
4,058,063	+				-0.4
4,058,066	+				+0.8
4,058,066	+				+1.8
4,058,066	+				-1.4
4,058,066	+				+0.7
4,058,066	+				-0.5
4,058,066	+				+0.6
4,058,066	+				-1.0
4,058,067	-				-1.3
4,058,090	+				+0.5
4,058,134	-				-0.7
4,058,223	+				+0.2
4,058,260	+				-0.7
4,058,348	-		PS417_18690	0.17	-1.8