Strain Fitness in Pseudomonas simiae WCS417 around PS417_18195

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,962,492	+				-0.1
3,962,629	+		PS417_18190	0.18	-0.8
3,962,653	+		PS417_18190	0.21	-1.7
3,962,822	+		PS417_18190	0.41	-1.5
3,962,823	-		PS417_18190	0.41	-1.0
3,962,823	-		PS417_18190	0.41	+0.8
3,962,858	+		PS417_18190	0.46	-1.3
3,962,859	-		PS417_18190	0.46	+0.3
3,963,082	+		PS417_18190	0.73	-1.2
3,963,083	-		PS417_18190	0.73	-0.2
3,963,320	+				-1.8
3,963,534	-		PS417_18195	0.13	+0.4
3,963,811	+		PS417_18195	0.30	-1.6
3,963,812	-				+0.2
3,963,949	+		PS417_18195	0.38	-0.6
3,964,126	+		PS417_18195	0.49	-3.7
3,964,463	-		PS417_18195	0.69	-2.4
3,964,769	+		PS417_18195	0.88	-0.6
3,964,847	-				-1.7
3,964,847	-				-3.7
3,964,847	-				+0.5
3,965,444	+		PS417_18200	0.53	+0.2
3,965,654	-		PS417_18200	0.78	+1.3
3,965,801	+				+0.0
3,965,802	-				+0.2
3,965,874	+				-0.0
3,965,875	-				+2.1
3,965,902	-				-1.8
3,965,906	+				-1.3
3,965,907	-				-1.2
3,965,937	+				+0.1
3,965,937	+				-0.8
3,965,959	-				-1.0
3,965,959	-				-0.4