Strain Fitness in Pseudomonas simiae WCS417 around PS417_18170

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,956,857	-		PS417_18160	0.47	-0.3
3,956,878	-		PS417_18160	0.51	-2.0
3,957,076	-				-0.1
3,957,190	-		PS417_18165	0.24	+1.2
3,957,192	-		PS417_18165	0.24	-0.9
3,957,226	-		PS417_18165	0.32	-1.2
3,957,532	+				+3.0
3,957,533	-				-0.1
3,957,579	-				-1.0
3,957,589	-				+0.9
3,957,643	-				+1.1
3,957,643	-				-2.2
3,957,648	+				-1.6
3,957,669	-				+0.6
3,957,918	-		PS417_18170	0.19	-2.7
3,958,011	+		PS417_18170	0.28	-3.1
3,958,011	+		PS417_18170	0.28	+0.5
3,958,012	-		PS417_18170	0.28	+1.7
3,958,014	+		PS417_18170	0.29	-0.4
3,958,015	-		PS417_18170	0.29	+2.2
3,958,015	-		PS417_18170	0.29	+1.8
3,958,244	+		PS417_18170	0.52	-1.0
3,958,244	+		PS417_18170	0.52	+3.1
3,958,245	-		PS417_18170	0.52	-1.0
3,958,245	-		PS417_18170	0.52	-1.4
3,958,360	-		PS417_18170	0.64	+2.1
3,958,360	-		PS417_18170	0.64	-0.0
3,958,486	-		PS417_18170	0.76	+1.6
3,958,519	-		PS417_18170	0.80	-0.3
3,958,519	-		PS417_18170	0.80	+0.2
3,958,644	-				-1.9
3,958,647	+				-2.1
3,958,663	+				-3.1
3,958,664	-				-3.1
3,958,930	+		PS417_18175	0.16	-0.8
3,958,930	+				-1.2
3,958,931	-		PS417_18175	0.16	+0.8
3,958,931	-		PS417_18175	0.16	-0.0
3,958,931	-		PS417_18175	0.16	-3.1
3,959,097	+		PS417_18175	0.30	-0.8
3,959,098	-		PS417_18175	0.31	+0.1
3,959,398	+		PS417_18175	0.56	+2.2
3,959,406	+		PS417_18175	0.57	-0.3
3,959,406	+		PS417_18175	0.57	+0.4
3,959,407	-		PS417_18175	0.57	-1.3
3,959,592	+		PS417_18175	0.72	+2.5
3,959,592	+		PS417_18175	0.72	+1.3
3,959,593	-		PS417_18175	0.72	+1.0
3,959,593	-		PS417_18175	0.72	+0.1
3,959,593	-				-0.8
3,959,640	-		PS417_18175	0.76	-1.9