Strain Fitness in Pseudomonas simiae WCS417 around PS417_17910

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,906,901	+				+1.6
3,906,901	+				-0.2
3,907,013	+				-1.3
3,907,049	+				+1.8
3,907,049	+				+0.3
3,907,056	-				-0.3
3,907,116	-				+0.6
3,907,220	+		PS417_17905	0.14	+0.8
3,907,266	+		PS417_17905	0.22	-0.1
3,907,851	+		PS417_17910	0.12	-3.0
3,907,851	+		PS417_17910	0.12	-2.4
3,907,851	+		PS417_17910	0.12	-0.7
3,907,851	+				-1.2
3,907,851	+		PS417_17910	0.12	-0.9
3,907,851	+		PS417_17910	0.12	+0.5
3,907,852	-		PS417_17910	0.12	-0.7
3,907,852	-		PS417_17910	0.12	-0.4
3,907,852	-		PS417_17910	0.12	+1.7
3,907,852	-		PS417_17910	0.12	+0.5
3,908,086	-		PS417_17910	0.28	+1.1
3,908,160	+		PS417_17910	0.33	+0.2
3,908,160	+		PS417_17910	0.33	-2.5
3,908,161	-		PS417_17910	0.33	-0.0
3,908,407	-		PS417_17910	0.49	-2.2
3,908,407	-		PS417_17910	0.49	-0.5
3,908,830	+		PS417_17910	0.77	-1.6
3,908,830	+		PS417_17910	0.77	-3.2
3,908,831	-		PS417_17910	0.77	+0.2
3,908,922	+		PS417_17910	0.83	-0.7
3,908,923	-				-1.3
3,908,923	-		PS417_17910	0.84	-0.3
3,908,923	-		PS417_17910	0.84	-0.0
3,908,928	+		PS417_17910	0.84	-0.0
3,908,929	-		PS417_17910	0.84	-0.9
3,909,000	-		PS417_17910	0.89	+0.8
3,909,280	-				+0.2
3,909,382	+				+0.3
3,909,477	+				+0.5
3,909,478	-				+0.9
3,909,478	-				-1.5
3,909,522	+		PS417_17915	0.10	+0.8
3,909,643	-		PS417_17915	0.19	+0.8
3,909,794	-		PS417_17915	0.31	-2.8
3,909,912	+		PS417_17915	0.40	+0.1
3,909,912	+		PS417_17915	0.40	+2.3
3,909,913	-		PS417_17915	0.40	-0.0
3,909,976	+		PS417_17915	0.45	-1.4
3,909,976	+		PS417_17915	0.45	+0.6
3,909,976	+		PS417_17915	0.45	-3.1
3,910,086	+		PS417_17915	0.53	-0.7
3,910,087	-		PS417_17915	0.53	-2.5
3,910,129	+		PS417_17915	0.56	-1.2
3,910,130	-		PS417_17915	0.56	-1.2
3,910,158	+		PS417_17915	0.58	+0.1
3,910,158	+		PS417_17915	0.58	+0.7
3,910,159	-		PS417_17915	0.58	-1.5
3,910,161	-		PS417_17915	0.59	-2.3