Strain Fitness in Pseudomonas simiae WCS417 around PS417_17205

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,756,563	+				+2.3
3,756,564	-				-0.1
3,756,569	-				+1.9
3,756,794	+		PS417_17200	0.29	+2.2
3,756,795	-				+3.5
3,756,795	-		PS417_17200	0.29	+0.9
3,756,889	-		PS417_17200	0.42	-1.8
3,757,053	+		PS417_17200	0.63	+0.9
3,757,053	+		PS417_17200	0.63	+1.8
3,757,053	+				-0.7
3,757,053	+		PS417_17200	0.63	-1.4
3,757,148	-		PS417_17200	0.75	+2.6
3,757,223	+		PS417_17200	0.85	+2.1
3,757,252	+		PS417_17200	0.89	-0.1
3,757,253	-		PS417_17200	0.89	+2.6
3,757,431	+				+2.6
3,757,468	+				+0.3
3,757,468	+				+1.1
3,757,468	+				-1.8
3,757,469	-				-3.4
3,757,469	-				-2.8
3,757,552	-		PS417_17205	0.14	-0.1
3,757,552	-		PS417_17205	0.14	-1.6
3,757,603	+		PS417_17205	0.19	+0.6
3,757,604	-		PS417_17205	0.19	-2.8
3,757,604	-		PS417_17205	0.19	-1.6
3,757,604	-		PS417_17205	0.19	-4.9
3,757,605	+		PS417_17205	0.19	-1.0
3,757,605	+		PS417_17205	0.19	+1.3
3,757,605	+		PS417_17205	0.19	-0.5
3,757,605	+		PS417_17205	0.19	-0.1
3,757,606	-		PS417_17205	0.20	-1.4
3,757,606	-		PS417_17205	0.20	-2.9
3,757,834	+		PS417_17205	0.45	-1.1
3,758,424	+				+0.9
3,758,511	-				-1.7
3,758,601	-		PS417_17210	0.13	-2.0
3,758,613	-		PS417_17210	0.14	-2.5
3,758,636	-		PS417_17210	0.16	-3.0
3,758,636	-		PS417_17210	0.16	-2.8
3,758,715	-		PS417_17210	0.22	-1.8
3,758,927	+		PS417_17210	0.40	+0.5
3,759,005	+		PS417_17210	0.46	+0.3
3,759,006	-		PS417_17210	0.46	-1.7
3,759,123	+		PS417_17210	0.56	-2.4
3,759,124	-		PS417_17210	0.56	+0.7
3,759,127	+		PS417_17210	0.56	-1.1
3,759,127	+		PS417_17210	0.56	-1.7
3,759,127	+		PS417_17210	0.56	-0.2
3,759,127	+		PS417_17210	0.56	-1.6
3,759,127	+		PS417_17210	0.56	+0.3
3,759,128	-		PS417_17210	0.56	+2.9
3,759,128	-		PS417_17210	0.56	-1.1
3,759,128	-		PS417_17210	0.56	+2.5
3,759,128	-		PS417_17210	0.56	-0.1
3,759,131	+		PS417_17210	0.57	+0.0
3,759,131	+		PS417_17210	0.57	-3.3
3,759,132	-		PS417_17210	0.57	-1.8
3,759,132	-		PS417_17210	0.57	-1.1
3,759,132	-		PS417_17210	0.57	-2.0
3,759,152	-		PS417_17210	0.58	+0.6
3,759,157	+		PS417_17210	0.59	-3.0
3,759,157	+		PS417_17210	0.59	+1.6
3,759,158	-		PS417_17210	0.59	+0.5