Strain Fitness in Pseudomonas simiae WCS417 around PS417_15220

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,335,940	-		PS417_15210	0.85	+0.5
3,336,183	+				+0.4
3,336,261	+		PS417_15215	0.23	-0.5
3,336,436	+		PS417_15215	0.58	+1.3
3,336,581	+		PS417_15215	0.87	+0.4
3,336,648	-				-2.6
3,336,648	-				+1.0
3,336,751	+				-3.5
3,336,764	+				-1.0
3,336,800	+				-0.1
3,336,914	+		PS417_15220	0.11	-0.9
3,336,914	+		PS417_15220	0.11	-0.2
3,336,914	+		PS417_15220	0.11	+0.6
3,336,915	-		PS417_15220	0.11	-2.8
3,336,987	-		PS417_15220	0.17	-0.2
3,336,987	-		PS417_15220	0.17	+1.1
3,336,990	+		PS417_15220	0.17	+1.9
3,336,990	+		PS417_15220	0.17	+0.3
3,336,991	-		PS417_15220	0.17	-0.2
3,337,145	+		PS417_15220	0.29	-0.5
3,337,146	-		PS417_15220	0.29	+1.1
3,337,175	+		PS417_15220	0.31	+0.7
3,337,175	+		PS417_15220	0.31	-1.8
3,337,176	-		PS417_15220	0.31	-2.4
3,337,254	-		PS417_15220	0.37	+0.7
3,337,254	-		PS417_15220	0.37	+0.5
3,337,472	+		PS417_15220	0.54	+1.2
3,337,472	+		PS417_15220	0.54	+0.8
3,337,473	-		PS417_15220	0.54	+0.1
3,337,473	-		PS417_15220	0.54	+0.8
3,337,473	-		PS417_15220	0.54	+1.1
3,337,598	+		PS417_15220	0.64	+0.9
3,337,632	+		PS417_15220	0.67	+0.3
3,337,632	+		PS417_15220	0.67	+1.5
3,337,633	-		PS417_15220	0.67	+0.9
3,337,633	-				-0.2
3,337,633	-		PS417_15220	0.67	+0.2
3,337,647	-		PS417_15220	0.68	+0.2
3,337,647	-		PS417_15220	0.68	+0.9
3,337,647	-		PS417_15220	0.68	+0.5
3,337,809	-		PS417_15220	0.81	-0.5
3,337,909	+		PS417_15220	0.89	-0.8
3,337,909	+		PS417_15220	0.89	+0.6
3,337,909	+		PS417_15220	0.89	+1.2
3,337,910	-		PS417_15220	0.89	+0.6
3,337,966	+				-1.2
3,337,966	+				-0.8
3,337,967	-				+2.4
3,337,967	-				-1.4
3,338,130	-				+0.0
3,338,161	+				+0.8
3,338,161	+				+0.2
3,338,663	+		PS417_15225	0.34	+0.5
3,338,663	+				-0.8
3,338,664	-		PS417_15225	0.34	-1.2
3,338,969	-		PS417_15225	0.67	-1.7