Strain Fitness in Pseudomonas simiae WCS417 around PS417_14960

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,269,606	+		PS417_14955	0.79	-1.1
3,269,698	+		PS417_14955	0.81	-0.2
3,269,725	-		PS417_14955	0.82	+1.0
3,269,842	-		PS417_14955	0.84	-0.9
3,269,918	-		PS417_14955	0.86	+2.3
3,269,933	+		PS417_14955	0.87	-1.2
3,269,933	+		PS417_14955	0.87	+0.1
3,269,933	+		PS417_14955	0.87	-0.2
3,269,933	+		PS417_14955	0.87	-1.2
3,269,934	-		PS417_14955	0.87	+0.2
3,269,934	-		PS417_14955	0.87	+1.2
3,269,934	-		PS417_14955	0.87	+1.3
3,270,038	+		PS417_14955	0.89	+0.8
3,270,039	-		PS417_14955	0.89	-3.4
3,270,039	-		PS417_14955	0.89	-1.0
3,270,089	-				-1.9
3,270,105	+				+0.8
3,270,105	+				+1.4
3,270,321	+				-0.7
3,270,322	-				+1.0
3,270,336	+				+0.2
3,270,421	+				-0.2
3,270,423	+				-0.0
3,270,423	+				-1.3
3,270,423	+				+2.1
3,270,423	+				+1.3
3,270,423	+				-1.0
3,270,423	+				+0.5
3,270,423	+				+0.8
3,270,423	+				+0.7
3,270,424	-				-0.1
3,270,424	-				+0.7
3,270,424	-				+0.8
3,270,424	-				+0.4
3,270,424	-				+0.8
3,270,424	-				+0.1
3,270,447	-				+1.1
3,270,448	+				+0.5
3,270,489	-				-2.3
3,270,965	+		PS417_14960	0.38	-4.1
3,270,965	+		PS417_14960	0.38	-2.6
3,270,969	+		PS417_14960	0.39	-4.4
3,270,969	+		PS417_14960	0.39	-3.8
3,271,013	+		PS417_14960	0.42	-1.3
3,271,013	+		PS417_14960	0.42	-4.2
3,271,013	+		PS417_14960	0.42	-3.5
3,271,014	-		PS417_14960	0.42	-2.7
3,271,014	-		PS417_14960	0.42	-4.7
3,271,014	-		PS417_14960	0.42	-2.8
3,271,014	-		PS417_14960	0.42	-1.8
3,271,276	-		PS417_14960	0.63	-5.0
3,271,349	+		PS417_14960	0.68	-3.0
3,271,361	+		PS417_14960	0.69	-5.7
3,271,361	+		PS417_14960	0.69	-3.1
3,271,371	+		PS417_14960	0.70	-2.6
3,271,613	+				-1.3
3,271,613	+		PS417_14960	0.89	-4.1
3,271,614	-		PS417_14960	0.89	-3.4
3,271,683	-				-0.2
3,271,730	+				-2.2
3,271,730	+				-2.2
3,271,743	-				-1.5
3,271,757	+				-4.6
3,271,866	-		PS417_14965	0.16	-2.9
3,271,866	-		PS417_14965	0.16	-2.1
3,271,866	-		PS417_14965	0.16	-4.4
3,272,157	-		PS417_14965	0.57	-5.0
3,272,300	-		PS417_14965	0.77	-1.3
3,272,366	-		PS417_14965	0.86	-2.1
3,272,505	+				-2.5
3,272,505	+				-2.4
3,272,506	-				+5.5
3,272,506	-				+5.9
3,272,583	+				-0.5
3,272,620	-				+2.0
3,272,620	-				-0.7