Strain Fitness in Pseudomonas simiae WCS417 around PS417_14785

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,230,590	-				+0.5
3,230,658	+				+0.2
3,230,658	+				-0.1
3,230,662	+				-0.5
3,230,669	+				-0.7
3,230,670	-				-0.4
3,230,706	+				-0.5
3,230,707	-				-0.3
3,231,037	+		PS417_14780	0.48	-0.2
3,231,084	-		PS417_14780	0.57	-2.5
3,231,084	-		PS417_14780	0.57	+1.3
3,231,084	-		PS417_14780	0.57	+0.7
3,231,084	-		PS417_14780	0.57	+0.2
3,231,161	-		PS417_14780	0.72	-3.3
3,231,378	+				-0.7
3,231,378	+				+0.7
3,231,451	+				+0.4
3,231,452	-				-0.2
3,231,472	-				-0.1
3,231,596	+				+0.1
3,231,611	+				+1.3
3,231,611	+				-0.7
3,231,612	-				-3.0
3,231,655	-		PS417_14785	0.13	-0.2
3,231,740	-		PS417_14785	0.18	+0.8
3,231,743	+		PS417_14785	0.19	+0.9
3,231,744	-		PS417_14785	0.19	+1.3
3,231,829	+		PS417_14785	0.24	-3.4
3,231,899	+		PS417_14785	0.29	+1.6
3,231,899	+		PS417_14785	0.29	-0.8
3,231,900	-		PS417_14785	0.29	+0.1
3,231,900	-		PS417_14785	0.29	+2.6
3,231,929	+		PS417_14785	0.31	-2.6
3,232,112	+		PS417_14785	0.43	+0.4
3,232,289	+		PS417_14785	0.55	+1.3
3,232,292	+		PS417_14785	0.55	-1.1
3,232,293	-		PS417_14785	0.55	-0.1
3,232,293	-				+3.2
3,232,293	-		PS417_14785	0.55	-1.7
3,232,293	-		PS417_14785	0.55	-0.1
3,232,307	+		PS417_14785	0.56	-2.9
3,232,307	+		PS417_14785	0.56	+2.7
3,232,308	-		PS417_14785	0.56	-0.3
3,232,308	-		PS417_14785	0.56	-0.3
3,232,308	-		PS417_14785	0.56	+1.3
3,232,319	+		PS417_14785	0.57	+0.0
3,232,320	-		PS417_14785	0.57	-2.2
3,232,320	-		PS417_14785	0.57	+1.6
3,232,341	-		PS417_14785	0.58	-1.3
3,232,625	-		PS417_14785	0.77	-2.0
3,232,718	+		PS417_14785	0.83	+0.0
3,232,718	+		PS417_14785	0.83	+0.7
3,232,718	+		PS417_14785	0.83	-0.2
3,232,718	+		PS417_14785	0.83	+1.5
3,232,718	+		PS417_14785	0.83	-0.7
3,232,719	-		PS417_14785	0.83	+1.4
3,232,730	+		PS417_14785	0.84	+1.1
3,232,942	-				+1.3
3,232,977	+				-2.2
3,232,977	+				+3.0
3,233,490	+				-0.9
3,233,500	+				-3.6
3,233,947	+				-2.6
3,233,947	+				-0.3
3,233,955	+				-1.0
3,233,956	-				+0.5