Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01460 and PS417_01465 are separated by 123 nucleotides PS417_01465 and PS417_01470 are separated by 348 nucleotides
PS417_01460: PS417_01460 - tRNA-Thr, at 325,847 to 325,922
_01460
PS417_01465: PS417_01465 - hypothetical protein, at 326,046 to 326,279
_01465
PS417_01470: PS417_01470 - cell division protein FtsQ, at 326,628 to 327,578
_01470
Position (kb) 326
327 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 325.155 kb on + strand at 325.159 kb on + strand at 325.159 kb on + strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.160 kb on - strand at 325.456 kb on + strand at 325.466 kb on + strand at 325.466 kb on + strand at 325.467 kb on - strand at 325.487 kb on + strand at 325.518 kb on - strand at 325.544 kb on - strand at 325.588 kb on + strand at 325.589 kb on - strand at 325.589 kb on - strand at 325.616 kb on - strand at 325.671 kb on + strand at 325.726 kb on + strand at 325.727 kb on - strand at 325.727 kb on - strand at 326.092 kb on - strand, within PS417_01465 at 326.119 kb on + strand, within PS417_01465 at 326.119 kb on + strand, within PS417_01465 at 326.119 kb on + strand, within PS417_01465 at 326.120 kb on - strand, within PS417_01465 at 326.120 kb on - strand, within PS417_01465 at 326.304 kb on + strand at 326.320 kb on + strand at 326.321 kb on - strand at 326.338 kb on + strand at 326.338 kb on + strand at 326.338 kb on + strand at 326.338 kb on + strand at 326.338 kb on + strand at 326.339 kb on - strand at 326.339 kb on - strand at 326.400 kb on - strand at 326.400 kb on - strand at 326.596 kb on + strand at 326.608 kb on + strand at 326.656 kb on + strand at 326.656 kb on + strand at 326.657 kb on - strand at 326.658 kb on + strand at 326.659 kb on - strand at 326.812 kb on - strand, within PS417_01470 at 326.988 kb on - strand at 326.988 kb on - strand, within PS417_01470 at 327.217 kb on + strand, within PS417_01470 at 327.218 kb on - strand, within PS417_01470 at 327.218 kb on - strand, within PS417_01470 at 327.218 kb on - strand, within PS417_01470 at 327.220 kb on - strand, within PS417_01470 at 327.220 kb on - strand, within PS417_01470 at 327.233 kb on + strand, within PS417_01470 at 327.234 kb on - strand, within PS417_01470 at 327.234 kb on - strand, within PS417_01470 at 327.234 kb on - strand, within PS417_01470
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Polymyxin B sulfate 0.003 mg/ml remove 325,155 + -1.9 325,159 + -2.2 325,159 + -0.5 325,160 - +1.3 325,160 - -2.4 325,160 - -1.5 325,160 - +1.4 325,160 - +4.2 325,160 - -1.1 325,456 + -0.2 325,466 + -0.7 325,466 + -0.3 325,467 - -0.1 325,487 + +0.4 325,518 - -2.9 325,544 - +0.5 325,588 + -2.3 325,589 - -0.1 325,589 - +0.3 325,616 - +1.1 325,671 + -2.7 325,726 + -2.9 325,727 - -3.2 325,727 - +1.4 326,092 - PS417_01465 0.20 +0.3 326,119 + PS417_01465 0.31 -2.3 326,119 + PS417_01465 0.31 -0.5 326,119 + PS417_01465 0.31 -2.5 326,120 - PS417_01465 0.32 -3.9 326,120 - PS417_01465 0.32 +0.1 326,304 + -0.2 326,320 + +0.2 326,321 - +0.1 326,338 + +0.1 326,338 + -0.5 326,338 + -0.1 326,338 + +1.0 326,338 + -1.4 326,339 - -0.2 326,339 - +0.0 326,400 - +1.2 326,400 - +1.8 326,596 + -2.8 326,608 + +0.2 326,656 + -1.0 326,656 + +1.2 326,657 - +0.8 326,658 + -1.6 326,659 - -2.4 326,812 - PS417_01470 0.19 -1.0 326,988 - +0.8 326,988 - PS417_01470 0.38 -0.3 327,217 + PS417_01470 0.62 +0.6 327,218 - PS417_01470 0.62 -2.7 327,218 - PS417_01470 0.62 +0.2 327,218 - PS417_01470 0.62 -1.5 327,220 - PS417_01470 0.62 +0.5 327,220 - PS417_01470 0.62 +1.5 327,233 + PS417_01470 0.64 -0.4 327,234 - PS417_01470 0.64 -1.2 327,234 - PS417_01470 0.64 -0.1 327,234 - PS417_01470 0.64 -0.9
Or see this region's nucleotide sequence