Strain Fitness in Pseudomonas simiae WCS417 around PS417_14545

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,178,556	-		PS417_14535	0.88	-2.4
3,178,579	+				-1.5
3,178,579	+				+0.3
3,178,691	+				+0.8
3,178,691	+				+0.0
3,178,692	-				-1.1
3,179,017	-		PS417_14540	0.71	-0.1
3,179,361	+		PS417_14545	0.17	+1.5
3,179,361	+		PS417_14545	0.17	+0.6
3,179,362	-		PS417_14545	0.17	-1.5
3,179,386	+		PS417_14545	0.18	+1.4
3,179,387	-		PS417_14545	0.18	+1.2
3,179,387	-		PS417_14545	0.18	+0.1
3,179,492	-		PS417_14545	0.26	-0.2
3,179,507	-		PS417_14545	0.27	-0.6
3,179,943	-		PS417_14545	0.58	-1.8
3,180,089	+		PS417_14545	0.69	-2.2
3,180,089	+		PS417_14545	0.69	+2.0
3,180,089	+		PS417_14545	0.69	-0.2
3,180,261	+				-0.8
3,180,363	+		PS417_14545	0.88	-0.2
3,180,363	+		PS417_14545	0.88	+0.6
3,180,363	+		PS417_14545	0.88	-1.0
3,180,363	+		PS417_14545	0.88	-2.0
3,180,364	-		PS417_14545	0.88	-1.8
3,180,502	-				+0.8
3,180,616	-				-0.8
3,180,616	-				+1.0
3,180,616	-				-2.3
3,180,652	+				-0.5
3,180,880	+		PS417_14550	0.29	+0.0
3,180,940	+		PS417_14550	0.34	+0.2
3,180,946	+		PS417_14550	0.35	+0.3
3,181,111	+				+1.8
3,181,130	-		PS417_14550	0.53	+0.1
3,181,423	+		PS417_14550	0.81	-2.0
3,181,424	-		PS417_14550	0.81	+0.9
3,181,447	+		PS417_14550	0.83	-0.5