Strain Fitness in Pseudomonas simiae WCS417 around PS417_14390

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,145,083	+		PS417_14380	0.87	-2.0
3,145,277	-				+0.9
3,145,470	+				-2.4
3,145,470	+				-3.1
3,145,470	+				-0.0
3,145,470	+				-2.7
3,145,470	+				+0.9
3,145,470	+				+0.3
3,145,471	-				+0.6
3,145,471	-				+1.2
3,145,471	-				+2.9
3,145,471	-				+0.1
3,145,471	-				+1.3
3,145,472	+				+0.7
3,145,472	+				+1.7
3,145,493	+				+0.4
3,145,494	-				-3.1
3,145,567	+				-0.5
3,146,288	+		PS417_14390	0.11	+0.9
3,146,289	-		PS417_14390	0.12	+0.5
3,146,688	-		PS417_14390	0.29	+1.2
3,146,688	-		PS417_14390	0.29	+0.8
3,146,688	-		PS417_14390	0.29	+0.9
3,146,688	-		PS417_14390	0.29	+0.0
3,147,069	-		PS417_14390	0.46	-0.1
3,147,116	-		PS417_14390	0.48	+0.6
3,147,295	-		PS417_14390	0.56	+0.8
3,147,295	-		PS417_14390	0.56	+0.5
3,147,295	-		PS417_14390	0.56	-0.7
3,147,295	-		PS417_14390	0.56	+0.1
3,147,295	-		PS417_14390	0.56	+2.6
3,147,296	+		PS417_14390	0.56	-1.3
3,147,296	+		PS417_14390	0.56	+1.8
3,147,297	-		PS417_14390	0.56	-2.4
3,147,393	+		PS417_14390	0.60	-0.3
3,147,393	+		PS417_14390	0.60	+0.4
3,147,393	+		PS417_14390	0.60	+1.9
3,147,394	-		PS417_14390	0.60	+0.0
3,147,394	-		PS417_14390	0.60	+1.2
3,147,395	+		PS417_14390	0.60	+1.7
3,147,395	+		PS417_14390	0.60	+0.4
3,147,395	+		PS417_14390	0.60	+1.1
3,147,396	-		PS417_14390	0.60	+0.3
3,147,396	-		PS417_14390	0.60	+0.8
3,147,396	-		PS417_14390	0.60	+1.0
3,147,733	+		PS417_14390	0.75	+1.6
3,147,808	+		PS417_14390	0.78	-0.6
3,148,279	-				-2.6
3,148,353	+				+0.7
3,148,353	+				-2.1
3,148,353	+				-2.5
3,148,354	-				-0.6
3,148,364	+				-0.1
3,148,364	+				+1.5
3,148,364	+				+0.9
3,148,365	-				-1.5
3,148,407	+				-0.1
3,148,407	+				+0.6
3,148,493	+				+0.3
3,148,493	+				-0.9
3,148,493	+				-0.7
3,148,494	-				-2.0
3,148,551	+				-3.1
3,148,551	+				+1.8
3,148,551	+				+0.9
3,148,551	+				-1.2
3,148,552	-				-2.4
3,148,552	-				-1.0
3,148,552	-				-0.1
3,148,793	-		PS417_14395	0.64	+1.0
3,149,047	+		PS417_14400	0.59	+0.2
3,149,074	-		PS417_14400	0.74	-0.2