Strain Fitness in Pseudomonas simiae WCS417 around PS417_14065

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,088,839	-				+1.1
3,089,244	+				+1.0
3,089,342	+				-2.0
3,089,343	-				+0.8
3,089,343	-				-3.3
3,089,392	+				-1.3
3,089,400	+				+1.0
3,089,400	+				-2.2
3,089,400	+				-0.7
3,089,401	-				-3.0
3,089,401	-				-1.8
3,089,401	-				-0.4
3,089,401	-				-0.2
3,089,431	+				+0.7
3,089,492	+				-1.1
3,089,573	+		PS417_14065	0.12	-3.3
3,089,574	-				-1.9
3,089,659	+		PS417_14065	0.23	-1.1
3,089,659	+		PS417_14065	0.23	-5.1
3,089,660	-		PS417_14065	0.23	-2.8
3,089,802	-		PS417_14065	0.40	-5.0
3,089,802	-		PS417_14065	0.40	-0.9
3,089,929	+		PS417_14065	0.55	-3.5
3,089,930	-		PS417_14065	0.55	-3.9
3,090,060	-		PS417_14065	0.70	-0.7
3,090,101	+		PS417_14065	0.75	-1.6
3,090,309	+				-6.4
3,090,309	+				-5.3
3,090,309	+				-4.4
3,090,309	+				-1.7
3,090,309	+				-3.7
3,090,310	-				-2.7
3,090,310	-				-3.9
3,090,310	-				-5.1
3,090,311	+				+0.3
3,090,311	+				-3.3
3,090,311	+				-3.5
3,090,311	+				-3.4
3,090,311	+				-4.2
3,090,312	-				-4.5
3,090,312	-				-4.5
3,090,312	-				-0.7
3,090,312	-				-3.6
3,090,312	-				-1.5
3,090,319	+				-1.9
3,090,319	+				-3.9
3,090,374	+				-5.4
3,090,374	+				-1.5
3,090,375	-				-0.6
3,090,375	-				+1.6
3,090,375	-				+1.3
3,090,427	+				-1.6
3,090,427	+				+0.6
3,090,492	+				+0.9
3,090,570	-				-0.9
3,090,611	-				+2.5
3,090,617	+				+0.1
3,090,617	+				+0.0
3,090,617	+				-0.5
3,090,618	-				-0.5
3,090,647	+		PS417_14070	0.15	+1.1
3,090,803	+				-1.9
3,090,803	+				+0.8
3,090,803	+				+4.6
3,090,803	+				-1.2
3,090,804	-				-1.9
3,090,926	+				-2.0
3,090,932	+				+0.7
3,090,932	+				-2.4
3,090,932	+				+1.1
3,090,932	+				-1.3
3,090,933	-				+0.8
3,090,934	+				-0.2
3,090,934	+				-1.3
3,090,934	+				+1.0
3,090,935	-				+0.6
3,090,935	-				-1.1
3,090,935	-				-1.6
3,090,935	-				-1.3
3,090,935	-				+2.4
3,090,972	-				+2.6
3,090,972	-				+1.3
3,090,972	-				+0.1
3,091,077	-				-1.0
3,091,134	+				-0.9
3,091,134	+				+1.3
3,091,138	+				+0.1
3,091,138	+				+1.4
3,091,138	+				+1.9
3,091,138	+				-0.0
3,091,138	+				-1.9
3,091,139	-				-3.0
3,091,139	-				-0.4
3,091,139	-				-1.3
3,091,139	-				+0.3
3,091,144	+				+0.6
3,091,145	-				-2.0
3,091,228	-				+0.1
3,091,228	-				-0.2
3,091,245	-				-1.7
3,091,247	+				+0.9
3,091,247	+				-2.2
3,091,281	+				-0.1
3,091,282	-				+0.5
3,091,282	-				-1.0
3,091,282	-				+1.7
3,091,307	-				-0.9