Strain Fitness in Pseudomonas simiae WCS417 around PS417_13990

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,072,572	+				+0.9
3,072,573	-				+0.1
3,072,573	-				-1.3
3,072,574	+				-1.4
3,072,692	+				+0.5
3,072,693	-				+0.1
3,072,800	+				-2.4
3,072,801	-		PS417_13985	0.10	+1.2
3,072,913	-		PS417_13985	0.26	+0.4
3,072,913	-		PS417_13985	0.26	-0.9
3,072,913	-		PS417_13985	0.26	-1.5
3,073,129	+		PS417_13985	0.57	-2.2
3,073,130	-		PS417_13985	0.57	-1.3
3,074,049	-		PS417_13990	0.57	+1.5
3,074,049	-		PS417_13990	0.57	+0.3
3,074,098	+		PS417_13990	0.62	+1.3
3,074,099	-		PS417_13990	0.62	+1.6
3,074,166	+		PS417_13990	0.70	+2.7
3,074,404	-				+1.6
3,074,490	+				+0.3
3,074,491	-				+0.3
3,074,491	-				-1.1
3,074,491	-				+1.2
3,074,513	-				-2.9
3,074,513	-				-0.5
3,074,865	+				+0.9
3,074,865	+		PS417_13995	0.34	-0.3
3,074,865	+		PS417_13995	0.34	-0.8
3,074,865	+		PS417_13995	0.34	+1.7
3,074,865	+		PS417_13995	0.34	-0.3
3,074,865	+		PS417_13995	0.34	+0.9
3,074,866	-		PS417_13995	0.35	-0.0
3,074,866	-		PS417_13995	0.35	+1.0
3,074,869	-		PS417_13995	0.35	-0.9
3,075,051	+		PS417_13995	0.53	-0.9
3,075,052	-		PS417_13995	0.53	+0.7
3,075,052	-		PS417_13995	0.53	-0.0
3,075,126	+				-0.7
3,075,126	+		PS417_13995	0.60	-0.2
3,075,128	+		PS417_13995	0.60	-0.2
3,075,162	+		PS417_13995	0.64	+2.1
3,075,276	+		PS417_13995	0.75	-2.1
3,075,391	-		PS417_13995	0.86	-0.0
3,075,393	-		PS417_13995	0.87	-0.6
3,075,393	-		PS417_13995	0.87	-0.9