Strain Fitness in Pseudomonas simiae WCS417 around PS417_13885

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,050,412	+		PS417_13880	0.59	-0.4
3,050,412	+		PS417_13880	0.59	-0.2
3,050,412	+				-0.9
3,050,412	+		PS417_13880	0.59	-0.3
3,050,413	-		PS417_13880	0.60	+1.5
3,050,413	-		PS417_13880	0.60	+1.1
3,050,450	+				-2.0
3,050,451	-		PS417_13880	0.62	-2.3
3,050,530	+		PS417_13880	0.67	-2.8
3,050,531	-		PS417_13880	0.67	-0.1
3,050,577	-		PS417_13880	0.69	-2.6
3,050,958	+				+1.1
3,050,972	+				+0.0
3,051,040	+				-0.6
3,051,091	-				+0.2
3,051,154	+				-1.3
3,051,154	+				-0.1
3,051,165	-				-0.7
3,051,241	-				-1.7
3,051,241	-				-1.8
3,051,313	+				+0.5
3,051,313	+				+0.5
3,051,313	+				+0.8
3,051,314	+				-2.1
3,051,330	+				+1.0
3,051,599	+		PS417_13885	0.80	+3.6
3,051,599	+		PS417_13885	0.80	+1.7
3,051,619	-		PS417_13885	0.86	+1.8
3,051,619	-		PS417_13885	0.86	+1.1
3,051,619	-		PS417_13885	0.86	+0.5
3,051,683	-				+2.1
3,051,779	-				+0.4
3,052,402	-		PS417_13890	0.55	-0.8