Strain Fitness in Pseudomonas simiae WCS417 around PS417_13495

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,972,603	+		PS417_13485	0.75	-2.1
2,972,651	+		PS417_13485	0.78	+0.2
2,972,651	+		PS417_13485	0.78	-0.1
2,972,831	-				+1.1
2,972,843	-				-1.7
2,972,994	+				+1.1
2,973,122	+		PS417_13490	0.54	-0.5
2,973,123	-		PS417_13490	0.54	-0.4
2,973,337	+				-1.9
2,973,337	+				+0.5
2,973,338	-				-0.1
2,973,342	-				-2.4
2,973,342	-				-1.8
2,973,342	-				+0.3
2,973,439	+				-0.2
2,973,439	+				+0.4
2,973,443	-				-0.5
2,973,443	-				-0.4
2,973,619	+		PS417_13495	0.13	-1.3
2,973,619	+		PS417_13495	0.13	-1.6
2,973,620	-		PS417_13495	0.13	+1.9
2,973,693	-		PS417_13495	0.17	+1.8
2,973,869	-		PS417_13495	0.28	-3.1
2,973,970	+		PS417_13495	0.34	+1.3
2,973,970	+		PS417_13495	0.34	+0.2
2,973,970	+		PS417_13495	0.34	-0.7
2,973,971	-		PS417_13495	0.34	+3.2
2,974,122	+		PS417_13495	0.43	-0.5
2,974,358	+		PS417_13495	0.57	-1.1
2,974,738	+		PS417_13495	0.81	-0.0
2,975,061	+				-0.4
2,975,062	-				+0.1
2,975,197	-				-1.2
2,975,216	-				+1.2
2,975,216	-				-0.4
2,975,302	-				-0.4
2,975,344	+		PS417_13500	0.13	+1.2
2,975,344	+		PS417_13500	0.13	-1.3
2,975,345	-		PS417_13500	0.13	+1.0
2,975,345	-		PS417_13500	0.13	+0.9
2,975,368	-		PS417_13500	0.14	-2.8
2,975,424	+		PS417_13500	0.16	+0.8
2,975,637	+				+1.7
2,975,706	-		PS417_13500	0.29	+0.9
2,975,934	+		PS417_13500	0.39	-2.0
2,975,935	-		PS417_13500	0.39	-0.9