Strain Fitness in Pseudomonas simiae WCS417 around PS417_01300
Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
281,192 | - | PS417_01295 | 0.47 | -1.8 | |
281,192 | - | PS417_01295 | 0.47 | -0.0 | |
281,577 | - | -2.6 | |||
281,645 | - | -1.7 | |||
281,778 | - | -0.8 | |||
281,778 | - | +1.3 | |||
281,867 | + | PS417_01300 | 0.23 | -1.5 | |
281,868 | - | PS417_01300 | 0.23 | -0.0 | |
281,977 | - | PS417_01300 | 0.47 | -1.0 | |
281,977 | - | PS417_01300 | 0.47 | -1.6 | |
281,977 | - | PS417_01300 | 0.47 | -1.3 | |
281,977 | - | PS417_01300 | 0.47 | +0.3 | |
281,977 | - | PS417_01300 | 0.47 | +1.4 | |
282,291 | + | -0.7 | |||
282,291 | + | -1.5 | |||
282,291 | + | -2.7 | |||
282,428 | + | +0.8 | |||
282,542 | + | -0.5 | |||
282,542 | + | PS417_01305 | 0.22 | -0.5 | |
282,701 | - | PS417_01305 | 0.33 | +0.1 | |
282,703 | + | PS417_01305 | 0.33 | -2.0 | |
282,704 | - | PS417_01305 | 0.33 | +0.0 | |
282,704 | - | PS417_01305 | 0.33 | -0.4 | |
282,704 | - | PS417_01305 | 0.33 | -1.0 |
Or see this region's nucleotide sequence