Strain Fitness in Pseudomonas simiae WCS417 around PS417_12885

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,816,791	-				+0.7
2,817,227	-		PS417_12880	0.54	+1.9
2,817,564	+				+1.4
2,817,595	+				-0.3
2,817,595	+				+0.8
2,817,596	-				+3.0
2,817,690	+				-3.0
2,817,691	-				+0.2
2,817,806	-				+0.1
2,817,822	+				-0.1
2,817,823	-				+0.6
2,817,925	+		PS417_12885	0.23	+1.7
2,818,042	+		PS417_12885	0.39	+2.0
2,818,042	+		PS417_12885	0.39	-0.7
2,818,044	+				+0.8
2,818,044	+		PS417_12885	0.39	+0.5
2,818,045	-		PS417_12885	0.39	-3.0
2,818,045	-		PS417_12885	0.39	-0.6
2,818,194	+		PS417_12885	0.60	+0.8
2,818,223	+		PS417_12885	0.64	+1.0
2,818,223	+		PS417_12885	0.64	+1.1
2,818,223	+		PS417_12885	0.64	-3.6
2,818,224	-		PS417_12885	0.64	-1.3
2,818,224	-		PS417_12885	0.64	+0.5
2,818,224	-		PS417_12885	0.64	+2.4
2,818,227	+		PS417_12885	0.65	+0.7
2,818,227	+		PS417_12885	0.65	-1.5
2,818,228	-		PS417_12885	0.65	+1.8
2,818,228	-		PS417_12885	0.65	+0.7
2,818,237	-				-0.7
2,818,410	-				+0.6
2,818,427	-				+1.0
2,818,460	+				-0.0
2,818,461	-				+1.6
2,818,475	+				+0.7
2,818,606	+				-0.8
2,818,795	+		PS417_12890	0.18	+0.4
2,818,795	+		PS417_12890	0.18	+1.5
2,818,796	-		PS417_12890	0.18	+0.8
2,818,812	+		PS417_12890	0.20	-1.2
2,819,050	+		PS417_12890	0.46	-0.7
2,819,050	+				-1.0
2,819,051	-		PS417_12890	0.46	-0.5
2,819,051	-		PS417_12890	0.46	+1.3
2,819,097	+		PS417_12890	0.51	-1.0
2,819,315	+		PS417_12890	0.75	-1.8
2,819,316	-		PS417_12890	0.75	-1.1