Strain Fitness in Pseudomonas simiae WCS417 around PS417_12780

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,791,033	+		PS417_12775	0.40	+0.7
2,791,072	-		PS417_12775	0.42	+0.3
2,791,072	-		PS417_12775	0.42	-1.5
2,791,072	-		PS417_12775	0.42	-2.5
2,791,532	+		PS417_12775	0.75	+1.9
2,791,533	-		PS417_12775	0.75	-0.9
2,791,741	+		PS417_12775	0.90	+2.1
2,791,741	+				-0.1
2,791,741	+		PS417_12775	0.90	+0.6
2,791,742	-		PS417_12775	0.90	-2.4
2,791,744	+				+1.3
2,791,744	+				-1.0
2,791,745	-				+0.6
2,791,745	-				+0.9
2,791,777	+				-0.1
2,791,777	+				+0.7
2,791,919	+				+0.7
2,791,978	+				-0.3
2,791,978	+				+0.1
2,792,070	+				+0.6
2,792,070	+				-1.3
2,792,070	+				+0.1
2,792,070	+				+0.6
2,792,071	-				-0.1
2,792,197	+		PS417_12780	0.19	+0.1
2,792,198	-		PS417_12780	0.19	-1.6
2,792,392	+		PS417_12780	0.32	-1.5
2,792,650	-		PS417_12780	0.51	+5.1
2,792,650	-		PS417_12780	0.51	-1.1
2,792,719	+		PS417_12780	0.56	+1.4
2,792,719	+		PS417_12780	0.56	+1.7
2,792,720	-		PS417_12780	0.56	-2.1
2,792,720	-		PS417_12780	0.56	-0.7
2,793,231	-				-2.2
2,793,258	-				-0.1
2,793,382	+				+0.9
2,793,383	-				-1.4
2,793,383	-				+0.9
2,793,624	-		PS417_12785	0.40	-3.4
2,793,624	-		PS417_12785	0.40	-0.7
2,793,624	-				-1.1
2,793,624	-		PS417_12785	0.40	+0.2
2,793,681	+		PS417_12785	0.63	-0.8
2,793,737	+		PS417_12785	0.87	+0.7
2,793,737	+		PS417_12785	0.87	+0.3
2,793,737	+		PS417_12785	0.87	+0.2
2,793,738	-		PS417_12785	0.87	+1.2
2,793,738	-		PS417_12785	0.87	+0.5
2,793,738	-		PS417_12785	0.87	+1.2
2,794,314	+		PS417_12790	0.86	+1.0