Strain Fitness in Pseudomonas simiae WCS417 around PS417_12650

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,753,034	+				+0.8
2,753,035	-		PS417_12645	0.61	+1.8
2,753,035	-		PS417_12645	0.61	-2.6
2,753,194	+		PS417_12645	0.71	+1.7
2,753,195	-		PS417_12645	0.71	-0.5
2,753,283	+		PS417_12645	0.76	-0.8
2,753,284	-		PS417_12645	0.76	-0.7
2,753,284	-		PS417_12645	0.76	-1.4
2,753,339	+		PS417_12645	0.80	+0.9
2,753,340	-		PS417_12645	0.80	-0.4
2,753,340	-		PS417_12645	0.80	+0.7
2,753,340	-		PS417_12645	0.80	-0.2
2,753,364	+		PS417_12645	0.81	-3.8
2,753,364	+		PS417_12645	0.81	-0.9
2,753,365	-		PS417_12645	0.81	-0.9
2,753,365	-		PS417_12645	0.81	-1.6
2,753,487	+		PS417_12645	0.89	-0.5
2,753,578	-				+0.5
2,753,578	-				+0.2
2,753,596	-				-0.5
2,753,704	+				-2.3
2,753,788	-		PS417_12650	0.13	-0.4
2,754,188	-		PS417_12650	0.55	+0.3
2,754,188	-		PS417_12650	0.55	-1.1
2,754,190	+		PS417_12650	0.56	-0.7
2,754,191	-		PS417_12650	0.56	+2.1
2,754,316	+				-0.4
2,754,634	-				-0.3
2,754,695	-				+2.5
2,754,695	-				+1.6
2,754,802	-				-0.1
2,754,802	-				+0.4
2,755,309	+				-0.9
2,755,479	+				-2.4
2,755,480	-				-0.0