Strain Fitness in Pseudomonas simiae WCS417 around PS417_12445

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,705,921	+		PS417_12435	0.84	+0.0
2,706,119	+				+0.3
2,706,177	+				-1.0
2,706,177	+				-3.1
2,706,178	-				-1.8
2,706,306	+				-3.1
2,706,306	+				-1.8
2,706,306	+				-0.4
2,706,344	+				-0.3
2,706,502	+				-2.5
2,706,502	+				-0.1
2,706,502	+				+0.2
2,706,502	+				-1.0
2,706,503	-				+1.4
2,706,503	-				+0.6
2,706,503	-				-0.4
2,706,547	+				+0.2
2,706,548	-				+0.5
2,706,565	+				-0.5
2,706,619	+				-2.1
2,706,768	+				+0.5
2,706,775	+				-0.1
2,706,775	+				+2.4
2,706,775	+				-0.8
2,706,776	-				+1.4
2,706,776	-				+2.4
2,706,791	+				-1.5
2,706,794	+				+0.8
2,706,795	-				+1.2
2,706,798	+				-1.0
2,706,798	+				+0.0
2,706,855	-				-0.7
2,706,884	+				+2.4
2,706,885	-				+0.9
2,706,919	+				+1.6
2,707,000	+		PS417_12445	0.19	+2.2
2,707,104	+		PS417_12445	0.30	-0.5
2,707,105	-		PS417_12445	0.30	-1.4
2,707,106	+		PS417_12445	0.30	+2.2
2,707,155	+		PS417_12445	0.35	+3.7
2,707,253	+		PS417_12445	0.45	+0.5
2,707,253	+		PS417_12445	0.45	+0.8
2,707,254	-		PS417_12445	0.45	-2.9
2,707,341	+		PS417_12445	0.54	-0.8
2,707,341	+		PS417_12445	0.54	+0.0
2,707,342	-		PS417_12445	0.54	-1.7
2,707,728	+				+0.3
2,707,728	+				-3.1
2,707,729	-				-2.4
2,707,902	-				+1.4
2,707,902	-				+0.5
2,707,943	-				-0.3
2,708,129	+		PS417_12450	0.22	-1.6
2,708,130	-		PS417_12450	0.22	+1.9
2,708,130	-		PS417_12450	0.22	+1.0
2,708,130	-		PS417_12450	0.22	+0.3
2,708,130	-		PS417_12450	0.22	+1.1
2,708,130	-		PS417_12450	0.22	+0.8
2,708,130	-		PS417_12450	0.22	+1.6
2,708,462	+		PS417_12450	0.44	+2.8
2,708,462	+		PS417_12450	0.44	-1.0
2,708,463	-		PS417_12450	0.44	+1.2
2,708,463	-		PS417_12450	0.44	+0.8