Strain Fitness in Pseudomonas simiae WCS417 around PS417_12290

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,668,472	+		PS417_12280	0.14	+1.6
2,668,529	+		PS417_12280	0.28	+0.1
2,668,791	+				-0.7
2,668,791	+				-1.0
2,668,966	+				-1.3
2,668,966	+				-0.1
2,668,966	+				+1.2
2,669,453	+				+4.0
2,669,495	+				+0.8
2,669,495	+				+0.2
2,669,496	-				-0.5
2,669,609	+		PS417_12290	0.13	-0.5
2,669,726	+				+0.8
2,670,056	+		PS417_12290	0.40	-3.2
2,670,057	-		PS417_12290	0.40	-2.7
2,670,240	-		PS417_12290	0.51	-1.0
2,670,317	+		PS417_12290	0.55	-3.1
2,670,317	+		PS417_12290	0.55	-0.6
2,670,317	+				+1.8
2,670,317	+		PS417_12290	0.55	-3.7
2,670,318	-		PS417_12290	0.55	-3.1
2,670,371	+		PS417_12290	0.59	-1.5
2,670,372	-		PS417_12290	0.59	-0.5
2,670,372	-		PS417_12290	0.59	-0.4
2,670,496	+		PS417_12290	0.66	-1.9
2,670,784	+		PS417_12290	0.84	+0.3
2,670,784	+		PS417_12290	0.84	-0.2
2,670,785	-		PS417_12290	0.84	-1.0
2,670,920	+				-0.5
2,670,921	-				-0.4
2,670,980	+				-0.7
2,671,048	+				+0.7
2,671,048	+				-2.4
2,671,048	+				-3.3
2,671,049	-				-0.9
2,671,049	-				+0.3
2,671,049	-				-1.1
2,671,052	+				+0.2
2,671,052	+				-1.3
2,671,052	+				+1.4
2,671,052	+				-0.2
2,671,052	+				-1.7
2,671,052	+				-1.8
2,671,052	+				+2.2
2,671,052	+				-1.5
2,671,052	+				+0.1
2,671,052	+				+0.0
2,671,052	+				-0.5
2,671,053	-				+0.1
2,671,053	-				-0.9
2,671,053	-				+0.8
2,671,053	-				-0.1
2,671,053	-				-0.0
2,671,053	-				+1.7
2,671,053	-				+1.0
2,671,053	-				-0.3
2,671,056	+				-0.5
2,671,056	+				+0.2
2,671,056	+				-0.4
2,671,056	+				+0.2
2,671,056	+				+0.0
2,671,056	+				-0.4
2,671,056	+				-0.8
2,671,056	+				+1.2
2,671,057	-				+1.4
2,671,057	-				-0.1
2,671,057	-				-0.2
2,671,057	-				-0.1
2,671,057	-				-0.2
2,671,057	-				+0.5
2,671,057	-				-0.8
2,671,057	-				+0.4
2,671,057	-				-2.2
2,671,058	+				-0.2
2,671,058	+				-0.6
2,671,058	+				-1.9
2,671,058	+				-0.0
2,671,058	+				-0.8
2,671,058	+				-0.1
2,671,058	+				-0.5
2,671,059	-				+0.8
2,671,059	-				+0.2
2,671,121	+				-1.0
2,671,168	+				+0.4
2,671,236	+				+0.0
2,671,257	+				+0.3
2,671,258	-				-0.1
2,671,331	-				-0.2
2,671,331	-				+1.1
2,671,433	+				-2.7
2,671,645	+		PS417_12300	0.17	-1.2
2,671,718	-		PS417_12300	0.23	-0.7
2,671,741	+		PS417_12300	0.26	+0.2
2,671,741	+		PS417_12300	0.26	-1.8
2,671,741	+		PS417_12300	0.26	-0.1
2,671,741	+		PS417_12300	0.26	+0.1
2,671,742	-		PS417_12300	0.26	-1.2
2,671,742	-				+1.3
2,671,803	+		PS417_12300	0.31	-1.0