Strain Fitness in Pseudomonas simiae WCS417 around PS417_12165

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,640,797	+		PS417_12160	0.33	+0.9
2,640,797	+		PS417_12160	0.33	-0.4
2,640,797	+		PS417_12160	0.33	-0.8
2,640,868	+		PS417_12160	0.38	-1.8
2,641,289	+		PS417_12160	0.68	-3.2
2,641,290	-		PS417_12160	0.68	-3.2
2,641,290	-		PS417_12160	0.68	-2.3
2,641,746	+				+0.2
2,641,751	-				+1.5
2,641,817	+				+1.3
2,641,943	+		PS417_12165	0.11	+1.2
2,641,943	+		PS417_12165	0.11	+0.4
2,641,943	+		PS417_12165	0.11	-0.8
2,641,944	-		PS417_12165	0.11	-1.2
2,641,944	-		PS417_12165	0.11	+0.7
2,641,955	+		PS417_12165	0.11	+0.9
2,643,090	+		PS417_12165	0.84	+1.3
2,643,091	-		PS417_12165	0.84	+1.3
2,643,194	-				+0.8
2,643,245	-				+1.3
2,643,349	-				-1.0
2,643,679	-				-0.2
2,643,880	-		PS417_12170	0.51	+0.5
2,643,921	-		PS417_12170	0.55	+0.7
2,644,060	-		PS417_12170	0.69	-0.3
2,644,138	-				+1.8
2,644,138	-		PS417_12170	0.76	+0.3
2,644,138	-		PS417_12170	0.76	+1.7
2,644,194	+				+4.0
2,644,205	+		PS417_12170	0.83	+1.0
2,644,216	-		PS417_12170	0.84	+1.5