Strain Fitness in Pseudomonas simiae WCS417 around PS417_12120

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,629,109	+		PS417_12110	0.74	-1.9
2,629,109	+		PS417_12110	0.74	+0.3
2,629,322	-				-0.2
2,629,327	+				-1.0
2,629,418	+		PS417_12115	0.23	-2.7
2,629,740	-				+0.2
2,629,787	+				+0.5
2,629,844	+				+1.7
2,629,844	+				+0.7
2,629,844	+				-0.8
2,629,845	-				+1.7
2,629,845	-				-2.7
2,629,845	-				+1.8
2,629,986	-		PS417_12120	0.13	+0.9
2,629,986	-		PS417_12120	0.13	-2.0
2,630,023	-				-0.8
2,630,106	+		PS417_12120	0.29	-1.3
2,630,107	-		PS417_12120	0.29	+0.4
2,630,107	-		PS417_12120	0.29	-0.4
2,630,583	+				-0.1
2,630,636	+				+0.7
2,631,109	-		PS417_12125	0.37	-2.2
2,631,216	+		PS417_12125	0.46	-1.8
2,631,418	+		PS417_12125	0.63	+1.3
2,631,435	+				+2.6
2,631,436	-		PS417_12125	0.64	-1.8
2,631,459	+		PS417_12125	0.66	-2.4
2,631,459	+		PS417_12125	0.66	-2.6
2,631,459	+		PS417_12125	0.66	+1.1
2,631,460	-		PS417_12125	0.66	-0.1
2,631,460	-		PS417_12125	0.66	-3.0