Strain Fitness in Pseudomonas simiae WCS417 around PS417_11690

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,513,815	-		PS417_11680	0.65	-0.2
2,513,815	-		PS417_11680	0.65	+1.1
2,514,232	-				+0.4
2,514,232	-				+1.4
2,514,427	-				-0.7
2,514,429	+				+0.2
2,514,469	+				-1.5
2,514,470	-				+2.2
2,514,609	+				-0.4
2,514,610	-				-0.7
2,514,709	+				-0.3
2,514,943	+				-0.0
2,514,944	-				+0.7
2,514,944	-				+1.0
2,515,334	-				-2.0
2,515,388	-				-1.2
2,515,532	-				-0.7
2,515,628	+				-2.7
2,515,924	+				+4.9
2,515,925	-				+0.1
2,516,041	+				-0.2
2,516,078	-				+2.2
2,516,078	-				-1.4
2,516,533	+		PS417_11690	0.13	-1.2
2,516,534	-		PS417_11690	0.13	+1.1
2,516,702	-		PS417_11690	0.14	+0.9
2,516,702	-		PS417_11690	0.14	+0.7
2,516,710	+		PS417_11690	0.14	+0.7
2,517,235	+		PS417_11690	0.18	-0.4
2,517,236	-		PS417_11690	0.18	+1.3
2,517,236	-		PS417_11690	0.18	+4.8
2,517,236	-		PS417_11690	0.18	-0.5
2,517,289	+		PS417_11690	0.18	+1.3
2,517,290	-				-0.2
2,517,436	+		PS417_11690	0.19	-0.0
2,517,574	+		PS417_11690	0.20	+1.5
2,517,641	-		PS417_11690	0.21	-0.4
2,517,658	-		PS417_11690	0.21	-2.2
2,519,147	-		PS417_11690	0.31	+3.4
2,519,416	+		PS417_11690	0.33	-0.9
2,519,438	-		PS417_11690	0.34	+0.5
2,519,438	-		PS417_11690	0.34	-0.4
2,520,741	-				-1.5
2,520,766	+		PS417_11690	0.43	+0.1
2,520,767	-		PS417_11690	0.43	-0.2
2,520,913	+		PS417_11690	0.44	+0.7
2,520,914	-		PS417_11690	0.44	+0.6
2,521,126	+		PS417_11690	0.46	-0.5
2,521,127	-		PS417_11690	0.46	+1.0
2,521,135	+		PS417_11690	0.46	+0.8
2,521,136	-		PS417_11690	0.46	+1.1
2,521,220	-		PS417_11690	0.46	+2.3
2,521,675	+		PS417_11690	0.49	+1.1
2,521,676	-		PS417_11690	0.49	-0.4
2,521,676	-		PS417_11690	0.49	-0.4
2,521,676	-		PS417_11690	0.49	+0.2
2,522,032	+		PS417_11690	0.52	-0.0
2,522,032	+		PS417_11690	0.52	-1.7
2,522,033	-				+0.1
2,522,107	+				+1.8
2,522,932	+		PS417_11690	0.58	+0.9
2,522,981	-		PS417_11690	0.59	-1.5
2,523,655	+		PS417_11690	0.64	-0.5
2,523,655	+		PS417_11690	0.64	+0.9
2,524,070	-		PS417_11690	0.67	-0.9
2,524,439	-		PS417_11690	0.69	-1.6
2,524,990	+		PS417_11690	0.73	+1.0
2,524,991	-		PS417_11690	0.73	+0.2
2,525,161	+		PS417_11690	0.74	-1.5
2,525,194	+				+0.8
2,525,195	-		PS417_11690	0.75	-1.7
2,525,647	+		PS417_11690	0.78	+0.1
2,525,939	+		PS417_11690	0.80	+1.4
2,525,939	+		PS417_11690	0.80	+1.4
2,525,939	+		PS417_11690	0.80	-1.3
2,525,939	+		PS417_11690	0.80	+1.6
2,526,016	+		PS417_11690	0.80	+0.5
2,526,016	+		PS417_11690	0.80	+0.8
2,526,070	+		PS417_11690	0.81	+1.2
2,526,344	-		PS417_11690	0.83	+0.1
2,526,344	-		PS417_11690	0.83	-2.0
2,526,758	-		PS417_11690	0.86	-0.0
2,527,025	-		PS417_11690	0.88	-0.6
2,527,213	+		PS417_11690	0.89	+1.3
2,527,213	+		PS417_11690	0.89	+2.5
2,527,391	-				+1.4
2,528,276	-				-0.6
2,528,362	+				+0.6
2,528,363	-				-0.0
2,528,473	+				-0.5
2,528,473	+				+0.9
2,528,474	-				-1.3
2,528,474	-				+0.4
2,528,474	-				-2.4
2,528,680	+				-2.7
2,528,685	-				-0.7
2,528,756	+				+0.6
2,528,757	-				-1.1
2,528,788	-				+0.0
2,528,986	+				-0.0
2,528,991	+				-3.0
2,529,126	-				+1.3
2,529,126	-				-2.7
2,529,203	+				-0.7
2,529,475	+				+0.0
2,529,682	+				+1.5