Strain Fitness in Pseudomonas simiae WCS417 around PS417_11545

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,481,211	+				+0.0
2,481,212	-				-1.6
2,481,926	+		PS417_11540	0.83	-2.3
2,481,926	+		PS417_11540	0.83	+0.1
2,481,926	+		PS417_11540	0.83	-0.9
2,481,927	-		PS417_11540	0.83	+2.3
2,481,932	+		PS417_11540	0.84	-1.2
2,481,933	-		PS417_11540	0.84	+1.7
2,481,945	-		PS417_11540	0.85	+2.1
2,482,061	+				-0.2
2,482,061	+				-0.0
2,482,402	+		PS417_11545	0.29	-1.1
2,482,741	+		PS417_11545	0.62	-1.8
2,482,742	-		PS417_11545	0.62	-1.4
2,482,867	+		PS417_11545	0.75	-3.0
2,483,117	+				-0.5
2,483,511	+		PS417_11550	0.33	-0.4
2,483,511	+		PS417_11550	0.33	+0.2
2,483,599	+		PS417_11550	0.41	+0.7
2,484,003	+		PS417_11550	0.78	-1.5
2,484,071	+				-1.3
2,484,071	+		PS417_11550	0.84	-0.7
2,484,072	-		PS417_11550	0.85	-0.7
2,484,111	+		PS417_11550	0.88	-0.1