Strain Fitness in Pseudomonas simiae WCS417 around PS417_11175

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,396,841	+		PS417_11170	0.75	-1.0
2,396,842	-		PS417_11170	0.75	+0.1
2,396,992	-		PS417_11170	0.85	-2.6
2,397,137	-				+0.9
2,397,153	+				+2.2
2,397,154	-				+0.3
2,397,502	+		PS417_11175	0.34	-2.4
2,397,502	+		PS417_11175	0.34	-0.8
2,398,281	-				-1.4
2,398,397	-		PS417_11180	0.16	-2.4
2,398,432	-		PS417_11180	0.21	-0.5
2,398,437	+		PS417_11180	0.22	-1.0
2,398,437	+		PS417_11180	0.22	-0.4
2,398,438	-		PS417_11180	0.22	+0.8
2,398,495	-		PS417_11180	0.31	-1.8
2,398,908	+				-1.4
2,398,933	-				-0.6
2,398,936	-				+0.4
2,398,941	+				-0.3
2,398,942	-				-1.1
2,399,016	-		PS417_11185	0.13	+0.5