Strain Fitness in Pseudomonas simiae WCS417 around PS417_10910

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,331,863	+		PS417_10900	0.64	-0.6
2,331,863	+				+0.2
2,331,864	-		PS417_10900	0.65	+0.3
2,332,127	+				+0.2
2,332,149	-				-0.2
2,332,149	-				-4.0
2,332,179	-				+0.7
2,332,179	-				-1.0
2,332,253	+		PS417_10905	0.11	-0.0
2,332,253	+		PS417_10905	0.11	+0.2
2,332,254	-		PS417_10905	0.11	-2.1
2,332,492	-		PS417_10905	0.49	+0.1
2,332,548	+		PS417_10905	0.58	+0.6
2,332,606	+		PS417_10905	0.67	-0.2
2,332,606	+		PS417_10905	0.67	-2.0
2,332,607	-				-0.8
2,332,657	+		PS417_10905	0.75	+0.2
2,332,657	+		PS417_10905	0.75	+2.8
2,332,658	-		PS417_10905	0.75	-1.7
2,332,688	+		PS417_10905	0.80	-3.6
2,332,688	+		PS417_10905	0.80	+0.2
2,332,688	+		PS417_10905	0.80	+1.3
2,332,689	-		PS417_10905	0.80	-0.5
2,332,845	-				+0.4
2,333,092	+		PS417_10910	0.25	-1.4
2,333,093	-		PS417_10910	0.25	-2.3
2,333,198	-		PS417_10910	0.34	+0.6
2,333,394	+		PS417_10910	0.51	-2.8
2,333,395	-		PS417_10910	0.51	-3.2
2,333,533	+		PS417_10910	0.64	-0.6
2,333,945	+				+1.5
2,333,945	+				-1.0
2,333,946	-				+1.0
2,333,946	-				-4.4
2,334,096	+				-1.0
2,334,096	+		PS417_10915	0.16	+1.2
2,334,097	-		PS417_10915	0.16	-0.4
2,334,286	+		PS417_10915	0.36	-0.3
2,334,450	+		PS417_10915	0.54	+0.2
2,334,451	-		PS417_10915	0.54	+0.8
2,334,451	-				+0.8
2,334,451	-		PS417_10915	0.54	-0.2
2,334,585	-		PS417_10915	0.68	+0.7
2,334,662	-		PS417_10915	0.76	-0.8
2,334,663	+		PS417_10915	0.76	-0.4
2,334,663	+		PS417_10915	0.76	-0.8
2,334,714	+		PS417_10915	0.82	-1.0
2,334,714	+		PS417_10915	0.82	-1.9
2,334,715	-		PS417_10915	0.82	+0.5
2,334,815	-				-3.6