Strain Fitness in Pseudomonas simiae WCS417 around PS417_01080

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
235,533	+		PS417_01075	0.26	-0.8
235,557	+		PS417_01075	0.28	-0.3
235,621	-		PS417_01075	0.33	+1.8
235,621	-		PS417_01075	0.33	-1.2
235,908	+		PS417_01075	0.54	+1.6
235,957	-		PS417_01075	0.58	-2.4
236,020	-		PS417_01075	0.62	-1.5
236,020	-		PS417_01075	0.62	+1.8
236,031	-		PS417_01075	0.63	-0.4
236,031	-		PS417_01075	0.63	-2.5
236,031	-		PS417_01075	0.63	+0.5
236,188	-		PS417_01075	0.75	-0.8
236,199	+		PS417_01075	0.76	-1.5
236,200	-		PS417_01075	0.76	-1.8
236,428	-				+0.6
236,428	-				+2.7
236,568	-				-1.1
236,570	+				+2.3
236,570	+				-2.1
236,571	-				-0.6
236,588	+				+0.4
236,589	-				-0.7
237,031	-		PS417_01080	0.42	-3.8
237,031	-		PS417_01080	0.42	-1.8
237,236	+		PS417_01080	0.59	-0.5
237,236	+		PS417_01080	0.59	-1.5
237,236	+		PS417_01080	0.59	+0.1
237,254	+		PS417_01080	0.61	-1.0
237,438	-		PS417_01080	0.76	-2.3
237,838	+				-0.5
238,103	+		PS417_01085	0.29	-1.4
238,103	+		PS417_01085	0.29	+0.7
238,103	+		PS417_01085	0.29	-0.3
238,104	-		PS417_01085	0.29	+1.3
238,104	-		PS417_01085	0.29	-1.7
238,104	-		PS417_01085	0.29	-3.2
238,104	-		PS417_01085	0.29	-1.2
238,163	-		PS417_01085	0.34	-0.9
238,429	+				+1.8
238,475	+		PS417_01085	0.59	+1.1
238,475	+		PS417_01085	0.59	-1.4
238,499	+		PS417_01085	0.61	-0.5
238,499	+				-1.0
238,499	+		PS417_01085	0.61	+2.1
238,500	-		PS417_01085	0.61	+0.8
238,500	-		PS417_01085	0.61	-1.7