Strain Fitness in Pseudomonas simiae WCS417 around PS417_10260

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,193,115	+		PS417_10255	0.38	+1.1
2,193,116	-		PS417_10255	0.38	-1.4
2,193,372	+		PS417_10255	0.61	+1.0
2,193,372	+		PS417_10255	0.61	+1.5
2,193,372	+		PS417_10255	0.61	+0.2
2,193,373	-		PS417_10255	0.61	+0.2
2,193,373	-		PS417_10255	0.61	+0.4
2,193,498	-		PS417_10255	0.73	+2.1
2,193,648	+		PS417_10255	0.87	-1.5
2,193,723	+				-0.0
2,193,790	-				+0.8
2,193,820	-				-0.2
2,193,821	+				+1.4
2,193,890	-				-0.5
2,193,943	+				-2.9
2,193,943	+				+0.2
2,193,943	+				+1.3
2,193,943	+				-0.2
2,193,944	-				+0.0
2,193,944	-				-1.7
2,193,944	-				+2.0
2,193,944	-				+0.8
2,193,944	-				-0.2
2,193,979	+		PS417_10260	0.11	-1.5
2,194,051	+		PS417_10260	0.34	-0.3
2,194,052	-		PS417_10260	0.35	-1.0
2,194,054	+		PS417_10260	0.35	-0.5
2,194,055	-		PS417_10260	0.36	-0.2
2,194,055	-		PS417_10260	0.36	+0.9
2,194,055	-		PS417_10260	0.36	+2.7
2,194,139	+		PS417_10260	0.63	-0.7
2,194,148	+		PS417_10260	0.66	-0.6
2,194,148	+		PS417_10260	0.66	-0.5
2,194,149	-		PS417_10260	0.67	+1.0
2,194,154	+		PS417_10260	0.68	+0.3
2,194,154	+		PS417_10260	0.68	+0.6
2,194,248	-				+1.3
2,194,263	-				+0.2
2,194,330	-		PS417_10265	0.26	+2.2
2,194,463	-		PS417_10265	0.69	-0.2
2,194,463	-		PS417_10265	0.69	+0.5
2,194,469	-		PS417_10265	0.71	+0.9
2,194,692	+		PS417_10270	0.20	-0.5
2,194,852	-				-1.7
2,194,884	+		PS417_10270	0.48	+1.1
2,195,040	+		PS417_10270	0.72	+0.0
2,195,097	+		PS417_10270	0.80	+1.0
2,195,097	+		PS417_10270	0.80	+0.4