Strain Fitness in Pseudomonas simiae WCS417 around PS417_10110

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,166,988	-		PS417_10100	0.77	-0.9
2,167,209	+				-0.3
2,167,210	-				-0.3
2,167,271	+				+0.3
2,167,272	-				+0.2
2,167,397	+		PS417_10105	0.24	-0.7
2,167,510	+				+1.8
2,167,511	-		PS417_10105	0.43	-0.8
2,167,511	-		PS417_10105	0.43	+0.4
2,167,528	+		PS417_10105	0.46	-0.3
2,167,623	+		PS417_10105	0.63	-1.2
2,167,623	+		PS417_10105	0.63	-1.1
2,167,842	-				+0.4
2,167,842	-				+1.2
2,168,061	+		PS417_10110	0.32	+1.1
2,168,062	-		PS417_10110	0.32	+0.8
2,168,062	-		PS417_10110	0.32	-0.3
2,168,062	-		PS417_10110	0.32	+5.3
2,168,156	-		PS417_10110	0.51	-0.5
2,168,156	-		PS417_10110	0.51	-0.6
2,168,401	+				+0.3
2,168,435	-				-0.5
2,168,486	+				+2.0
2,168,490	+				-3.8
2,168,490	+				-2.2
2,168,491	-				-0.8
2,168,579	+				-2.2
2,168,580	-				+1.2
2,168,580	-				+1.8
2,168,580	-				+0.3
2,168,580	-				-1.0
2,168,580	-				+0.2
2,168,760	-		PS417_10120	0.25	-0.9
2,168,857	+		PS417_10120	0.52	+0.3
2,168,858	-		PS417_10120	0.52	+1.8
2,168,858	-		PS417_10120	0.52	+0.2
2,169,303	+		PS417_10125	0.46	+0.3